A review of multiscale computational methods in polymeric materials
A Gooneie, S Schuschnigg, C Holzer - Polymers, 2017 - mdpi.com
Polymeric materials display distinguished characteristics which stem from the interplay of
phenomena at various length and time scales. Further development of polymer systems …
phenomena at various length and time scales. Further development of polymer systems …
Metadynamics as a tool for exploring free energy landscapes of chemical reactions
The metadynamics or hills method is a relatively new molecular dynamics technique aimed
to enhance the sampling of separated regions in phase space and map out the underlying …
to enhance the sampling of separated regions in phase space and map out the underlying …
Esca** free-energy minima
We introduce a powerful method for exploring the properties of the multidimensional free
energy surfaces (FESs) of complex many-body systems by means of coarse-grained non …
energy surfaces (FESs) of complex many-body systems by means of coarse-grained non …
Energy landscapes
DJ Wales - Atomic clusters and nanoparticles. Agregats atomiques …, 2002 - Springer
This overview of energy landscapes will focus on some rigorous properties of potential
energy surfaces (PES's), especially the symmetry properties of steepest-descent paths, and …
energy surfaces (PES's), especially the symmetry properties of steepest-descent paths, and …
String method for the study of rare events
We present an efficient method for computing the transition pathways, free energy barriers,
and transition rates in complex systems with relatively smooth energy landscapes. The …
and transition rates in complex systems with relatively smooth energy landscapes. The …
Transition path sampling
In this chapter we present the foundations and methodology of transition path sampling
comprehensively, including details important for its implementation. We first discuss the …
comprehensively, including details important for its implementation. We first discuss the …
From A to B in free energy space
The authors present a new method for searching low free energy paths in complex
molecular systems at finite temperature. They introduce two variables that are able to …
molecular systems at finite temperature. They introduce two variables that are able to …
Discrete path sampling
DJ Wales - Molecular physics, 2002 - Taylor & Francis
A theoretical framework is developed for the calculation of rate constants by sampling
connected pathways composed of local minima and transition states that link them together …
connected pathways composed of local minima and transition states that link them together …
[PDF][PDF] Finite temperature string method for the study of rare events
A method is presented for the study of rare events such as conformational changes arising in
activated processes whose reaction coordinate is not known beforehand and for which the …
activated processes whose reaction coordinate is not known beforehand and for which the …
An automated method to find transition states using chemical dynamics simulations
E Martínez‐Núñez - Journal of computational chemistry, 2015 - Wiley Online Library
A procedure to automatically find the transition states (TSs) of a molecular system (MS) is
proposed. It has two components: high‐energy chemical dynamics simulations (CDS), and …
proposed. It has two components: high‐energy chemical dynamics simulations (CDS), and …