Attention is all you need: utilizing attention in AI-enabled drug discovery
Recently, attention mechanism and derived models have gained significant traction in drug
development due to their outstanding performance and interpretability in handling complex …
development due to their outstanding performance and interpretability in handling complex …
Comprehensive evaluation of deep and graph learning on drug–drug interactions prediction
Recent advances and achievements of artificial intelligence (AI) as well as deep and graph
learning models have established their usefulness in biomedical applications, especially in …
learning models have established their usefulness in biomedical applications, especially in …
DSN-DDI: an accurate and generalized framework for drug–drug interaction prediction by dual-view representation learning
Drug–drug interaction (DDI) prediction identifies interactions of drug combinations in which
the adverse side effects caused by the physicochemical incompatibility have attracted much …
the adverse side effects caused by the physicochemical incompatibility have attracted much …
Geometric interaction graph neural network for predicting protein–ligand binding affinities from 3d structures (gign)
Predicting protein–ligand binding affinities (PLAs) is a core problem in drug discovery.
Recent advances have shown great potential in applying machine learning (ML) for PLA …
Recent advances have shown great potential in applying machine learning (ML) for PLA …
Application of Artificial Intelligence in Drug–Drug Interactions Prediction: A Review
Y Zhang, Z Deng, X Xu, Y Feng… - Journal of chemical …, 2023 - ACS Publications
Drug–drug interactions (DDI) are a critical aspect of drug research that can have adverse
effects on patients and can lead to serious consequences. Predicting these events …
effects on patients and can lead to serious consequences. Predicting these events …
MDDI-SCL: predicting multi-type drug-drug interactions via supervised contrastive learning
S Lin, W Chen, G Chen, S Zhou, DQ Wei… - Journal of …, 2022 - Springer
The joint use of multiple drugs may cause unintended drug-drug interactions (DDIs) and
result in adverse consequence to the patients. Accurate identification of DDI types can not …
result in adverse consequence to the patients. Accurate identification of DDI types can not …
Learning motif-based graphs for drug–drug interaction prediction via local–global self-attention
Y Zhong, G Li, J Yang, H Zheng, Y Yu… - Nature Machine …, 2024 - nature.com
Unexpected drug–drug interactions (DDIs) are important issues for both pharmaceutical
research and clinical applications due to the high risk of causing severe adverse drug …
research and clinical applications due to the high risk of causing severe adverse drug …
A dual graph neural network for drug–drug interactions prediction based on molecular structure and interactions
M Ma, X Lei - PLOS Computational Biology, 2023 - journals.plos.org
Expressive molecular representation plays critical roles in researching drug design, while
effective methods are beneficial to learning molecular representations and solving related …
effective methods are beneficial to learning molecular representations and solving related …
TCMBank: bridges between the largest herbal medicines, chemical ingredients, target proteins, and associated diseases with intelligence text mining
Traditional Chinese Medicine (TCM) has long been viewed as a precious source of modern
drug discovery. AI-assisted drug discovery (AIDD) has been investigated extensively …
drug discovery. AI-assisted drug discovery (AIDD) has been investigated extensively …
DSIL-DDI: a domain-invariant substructure interaction learning for generalizable drug–drug interaction prediction
Z Tang, G Chen, H Yang, W Zhong… - IEEE Transactions on …, 2023 - ieeexplore.ieee.org
Drug–drug interactions (DDIs) trigger unexpected pharmacological effects in vivo, often with
unknown causal mechanisms. Deep learning methods have been developed to better …
unknown causal mechanisms. Deep learning methods have been developed to better …