▪ Abstract DNA secondary structure plays an important role in biology, genoty**
diagnostics, a variety of molecular biology techniques, in vitro–selected DNA catalysts …

Complexes of platinum (II) with polypyridine (that is, the multidentate ligands related to
pyridine, such as bipyridine or terpyridine) have rich photophysical properties. These …

Owing to its longevity and enormous information density, DNA, the molecule encoding
biological information, has emerged as a promising archival storage medium. However, due …

Fluorescence correlation spectroscopy (FCS) is an experimental technique using statistical
analysis of the fluctuations of fluorescence in a system in order to decipher dynamic …

We introduce an extended version of oxDNA, a coarse-grained model of deoxyribonucleic
acid (DNA) designed to capture the thermodynamic, structural, and mechanical properties of …

Although molecular dynamics (MD) simulations have been used extensively to study the
structural dynamics of proteins, the role of MD simulation in studies of nucleic acid based …

Nucleic acid hairpins provide a powerful model system for probing the formation of
secondary structure. We report a systematic study of the kinetics and thermodynamics of the …

originally designed to reproduce the properties of DNA molecules with average sequences.
The new parametrization introduces sequence-dependent stacking and base-pairing …

1. INTRODUCTION: GOALS OF MULTICHROMOPHORE STUDIES Multichromophoric
systems have gained intense interest in recent decades. 1 The arraying of chromophores at …

The expression and spatial profile of multiple RNA species at high precision in single cells is
key information for understanding cellular behaviors and functions. Fluorescence …