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Emerging role of tumor-related functional peptides encoded by lncRNA and circRNA
P Wu, Y Mo, M Peng, T Tang, Y Zhong, X Deng… - Molecular cancer, 2020 - Springer
Non-coding RNAs do not encode proteins and regulate various oncological processes. They
are also important potential cancer diagnostic and prognostic biomarkers. Bioinformatics …
are also important potential cancer diagnostic and prognostic biomarkers. Bioinformatics …
Epigenetics: Roles and therapeutic implications of non-coding RNA modifications in human cancers
As next-generation sequencing (NGS) is lea** forward, more than 160 covalent RNA
modification processes have been reported, and they are widely present in every organism …
modification processes have been reported, and they are widely present in every organism …
m6A-Atlas: a comprehensive knowledgebase for unraveling the N6-methyladenosine (m6A) epitranscriptome
Abstract N 6-Methyladenosine (m6A) is the most prevalent RNA modification on mRNAs and
lncRNAs. It plays a pivotal role during various biological processes and disease …
lncRNAs. It plays a pivotal role during various biological processes and disease …
m7GHub: deciphering the location, regulation and pathogenesis of internal mRNA N7-methylguanosine (m7G) sites in human
Motivation Recent progress in N7-methylguanosine (m7G) RNA methylation studies has
focused on its internal (rather than capped) presence within mRNAs. Tens of thousands of …
focused on its internal (rather than capped) presence within mRNAs. Tens of thousands of …
RMDisease: a database of genetic variants that affect RNA modifications, with implications for epitranscriptome pathogenesis
Deciphering the biological impacts of millions of single nucleotide variants remains a major
challenge. Recent studies suggest that RNA modifications play versatile roles in essential …
challenge. Recent studies suggest that RNA modifications play versatile roles in essential …
Advances in the profiling of N6-methyladenosine (m6A) modifications
H Zheng, X Zhang, N Sui - Biotechnology Advances, 2020 - Elsevier
Over 160 RNA modifications have been identified, including N 7-methylguanine (m 7 G), N 6-
methyladenosine (m 6 A), and 5-methylcytosine (m 5 C). These modifications play key roles …
methyladenosine (m 6 A), and 5-methylcytosine (m 5 C). These modifications play key roles …
RF-PseU: a random forest predictor for RNA pseudouridine sites
One of the ubiquitous chemical modifications in RNA, pseudouridine modification is crucial
for various cellular biological and physiological processes. To gain more insight into the …
for various cellular biological and physiological processes. To gain more insight into the …
Predicting RNA 5‐Methylcytosine Sites by Using Essential Sequence Features and Distributions
Methylation is one of the most common and considerable modifications in biological systems
mediated by multiple enzymes. Recent studies have shown that methylation has been …
mediated by multiple enzymes. Recent studies have shown that methylation has been …
Circular RNAs with protein-coding ability in oncogenesis
As ubiquitously expressed transcripts in eukaryotes, circular RNAs (circRNAs) are covalently
closed and lack a 5′-cap and 3′-polyadenylation (poly (A)) tail. Initially, circRNAs were …
closed and lack a 5′-cap and 3′-polyadenylation (poly (A)) tail. Initially, circRNAs were …
[HTML][HTML] Bioinformatics approaches for deciphering the epitranscriptome: recent progress and emerging topics
Post-transcriptional RNA modification occurs on all types of RNA and plays a vital role in
regulating every aspect of RNA function. Thanks to the development of high-throughput …
regulating every aspect of RNA function. Thanks to the development of high-throughput …