[HTML][HTML] Classical and reactive molecular dynamics: Principles and applications in combustion and energy systems

Q Mao, M Feng, XZ Jiang, Y Ren, KH Luo… - Progress in Energy and …, 2023 - Elsevier
Molecular dynamics (MD) has evolved into a ubiquitous, versatile and powerful
computational method for fundamental research in science branches such as biology …

The ReaxFF reactive force-field: development, applications and future directions

TP Senftle, S Hong, MM Islam, SB Kylasa… - npj Computational …, 2016 - nature.com
The reactive force-field (ReaxFF) interatomic potential is a powerful computational tool for
exploring, develo** and optimizing material properties. Methods based on the principles …

Extension of the ReaxFF combustion force field toward syngas combustion and initial oxidation kinetics

C Ashraf, ACT Van Duin - The Journal of Physical Chemistry A, 2017 - ACS Publications
A detailed insight of key reactive events related to oxidation and pyrolysis of hydrocarbon
fuels further enhances our understanding of combustion chemistry. Though comprehensive …

ReaxFF molecular dynamics simulations of thermal reactivity of various fuels in pyrolysis and combustion

X Li, M Zheng, C Ren, L Guo - Energy & Fuels, 2021 - ACS Publications
The methodology development and applications of ReaxFF molecular dynamics (ReaxFF
MD) in unraveling the complex reactions and kinetics for pyrolysis and oxidation of organic …

Molecular insight into pyrolysis processes via reactive force field molecular dynamics: A state-of-the-art review

G Li, F Zheng, Q Huang, J Wang, B Niu, Y Zhang… - Journal of Analytical and …, 2022 - Elsevier
Molecular simulations based on reactive force-fields (ReaxFF) have been applied as a
powerful tool for exploring the pyrolysis process of complex carbonaceous materials. It can …

Graphics processing units in bioinformatics, computational biology and systems biology

MS Nobile, P Cazzaniga, A Tangherloni… - Briefings in …, 2017 - academic.oup.com
Abstract Several studies in Bioinformatics, Computational Biology and Systems Biology rely
on the definition of physico-chemical or mathematical models of biological systems at …

Pyrolysis of binary fuel mixtures at supercritical conditions: A ReaxFF molecular dynamics study

C Ashraf, S Shabnam, A Jain, Y Xuan, ACT van Duin - Fuel, 2019 - Elsevier
Combustion devices such as rocket engines, gas turbines and HCCI engines frequently
operate at a pressure higher than the critical pressure of the fuel or the oxidizer. This …

Alphasparse: Generating high performance spmv codes directly from sparse matrices

Z Du, J Li, Y Wang, X Li, G Tan… - … Conference for High …, 2022 - ieeexplore.ieee.org
Sparse Matrix-Vector multiplication (SpMV) is an essential computational kernel in many
application scenarios. Tens of sparse matrix formats and implementations have been …

JAX-ReaxFF: a gradient-based framework for fast optimization of reactive force fields

MC Kaymak, A Rahnamoun, KA O'Hearn… - Journal of Chemical …, 2022 - ACS Publications
The reactive force field (ReaxFF) model bridges the gap between traditional classical
models and quantum mechanical (QM) models by incorporating dynamic bonding and …