Generic nature of the condensed states of proteins
Proteins undergoing liquid–liquid phase separation are being discovered at an increasing
rate. Since at the high concentrations present in the cell most proteins would be expected to …
rate. Since at the high concentrations present in the cell most proteins would be expected to …
A glimpse of structural biology through X-ray crystallography
Y Shi - Cell, 2014 - cell.com
Since determination of the myoglobin structure in 1957, X-ray crystallography, as the
anchoring tool of structural biology, has played an instrumental role in deciphering the …
anchoring tool of structural biology, has played an instrumental role in deciphering the …
DNA-dependent formation of transcription factor pairs alters their binding specificity
Gene expression is regulated by transcription factors (TFs), proteins that recognize short
DNA sequence motifs,,. Such sequences are very common in the human genome, and an …
DNA sequence motifs,,. Such sequences are very common in the human genome, and an …
[HTML][HTML] DNA-binding specificities of human transcription factors
Although the proteins that read the gene regulatory code, transcription factors (TFs), have
been largely identified, it is not well known which sequences TFs can recognize. We have …
been largely identified, it is not well known which sequences TFs can recognize. We have …
The role of DNA shape in protein–DNA recognition
The recognition of specific DNA sequences by proteins is thought to depend on two types of
mechanism: one that involves the formation of hydrogen bonds with specific bases, primarily …
mechanism: one that involves the formation of hydrogen bonds with specific bases, primarily …
Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 Å
NP Pavletich, CO Pabo - Science, 1991 - science.org
The zinc finger DNA-binding motif occurs in many proteins that regulate eukaryotic gene
expression. The crystal structure of a complex containing the three zinc fingers from Zif268 …
expression. The crystal structure of a complex containing the three zinc fingers from Zif268 …
Origins of specificity in protein-DNA recognition
Specific interactions between proteins and DNA are fundamental to many biological
processes. In this review, we provide a revised view of protein-DNA interactions that …
processes. In this review, we provide a revised view of protein-DNA interactions that …
Crystal structure of a p53 tumor suppressor-DNA complex: understanding tumorigenic mutations
Y Cho, S Gorina, PD Jeffrey, NP Pavletich - Science, 1994 - science.org
Mutations in the p53 tumor suppressor are the most frequently observed genetic alterations
in human cancer. The majority of the mutations occur in the core domain which contains the …
in human cancer. The majority of the mutations occur in the core domain which contains the …
[HTML][HTML] Structural perspective of cooperative transcription factor binding
Highlights•Transcription factors can cooperate with each other via multiple mechanisms that
have different specificities and ranges.•Cooperativity can result from direct protein–protein …
have different specificities and ranges.•Cooperativity can result from direct protein–protein …
Crystal structure of a CAP-DNA complex: the DNA is bent by 90
SC Schultz, GC Shields, TA Steitz - Science, 1991 - science.org
The 3 angstrom resolution crystal structure of the Escherichia coli catabolite gene activator
protein (CAP) complexed with a 30-base pair DNA sequence shows that the DNA is bent by …
protein (CAP) complexed with a 30-base pair DNA sequence shows that the DNA is bent by …