The uses and abuses of tree thinking in cultural evolution

CL Evans, SJ Greenhill, J Watts… - … of the Royal …, 2021 - royalsocietypublishing.org
Modern phylogenetic methods are increasingly being used to address questions about
macro-level patterns in cultural evolution. These methods can illuminate the unobservable …

Genome evolution and the future of phylogenomics of non-avian reptiles

DC Card, WB Jennings, SV Edwards - Animals, 2023 - mdpi.com
Simple Summary As a group of organisms, non-avian reptiles, most of which are the~
11,000 species of lizards and snakes, are an extraordinarily diverse group, displaying a …

[HTML][HTML] Evaluating taxonomic inflation: towards evidence-based species delimitation in Eurasian vipers (Serpentes: Viperinae)

I Freitas, S Ursenbacher, K Mebert, O Zinenko… - Amphibia-Reptilia, 2020 - brill.com
The designation of taxonomic units has important implications for the understanding and
conservation of biodiversity. Eurasian vipers are a monophyletic group of viperid snakes …

Out of Sight, Out of Mind: Widespread Nuclear and Plastid-Nuclear Discordance in the Flowering Plant Genus Polemonium (Polemoniaceae) Suggests Widespread …

JP Rose, CAP Toledo, EM Lemmon… - Systematic …, 2021 - academic.oup.com
Phylogenomic data from a rapidly increasing number of studies provide new evidence for
resolving relationships in recently radiated clades, but they also pose new challenges for …

Phylogenetic trees and networks can serve as powerful and complementary approaches for analysis of genomic data

C Blair, C Ané - Systematic Biology, 2020 - academic.oup.com
Genomic data have had a profound impact on nearly every biological discipline. In
systematics and phylogenetics, the thousands of loci that are now being sequenced can be …

A novel probe set for the phylogenomics and evolution of RTA spiders

J Zhang, Z Li, J Lai, Z Zhang, F Zhang - Cladistics, 2023 - Wiley Online Library
Spiders are important models for evolutionary studies of web building, sexual selection and
adaptive radiation. The recent development of probes for UCE (ultra‐conserved element) …

A phylogenomic approach resolves the backbone of Prunus (Rosaceae) and identifies signals of hybridization and allopolyploidy

RGJ Hodel, E Zimmer, J Wen - Molecular Phylogenetics and Evolution, 2021 - Elsevier
The genus Prunus, which contains 250–400 species, has ample genomic resources for the
economically important taxa in the group including cherries, peaches, and almonds …

New approaches to species delimitation and population structure of anthozoans: Two case studies of octocorals using ultraconserved elements and exons

KL Erickson, A Pentico, AM Quattrini… - Molecular Ecology …, 2021 - Wiley Online Library
As coral populations decline worldwide in the face of ongoing environmental change,
documenting their distribution, diversity and conservation status is now more imperative than …

Phylogenomic discordance is driven by wide-spread introgression and incomplete lineage sorting during rapid species diversification within rattlesnakes (Viperidae …

EA Myers, RM Rautsaw, M Borja, J Jones… - Systematic …, 2024 - academic.oup.com
Abstract.—Phylogenomics allows us to uncover the historical signal of evolutionary
processes through time and estimate phylogenetic networks accounting for these signals …

Pollinator shifts despite hybridisation in the Cape's hyperdiverse heathers (Erica, Ericaceae)

SD Musker, MD Pirie, NM Nürk - Molecular Ecology, 2024 - Wiley Online Library
Interrogating the ecological and geographic factors that influence population divergence
dynamics can reveal why some groups of organisms diversify more prolifically than others …