Whole‐genome sequencing approaches for conservation biology: Advantages, limitations and practical recommendations

AP Fuentes‐Pardo, DE Ruzzante - Molecular ecology, 2017 - Wiley Online Library
Whole‐genome resequencing (WGR) is a powerful method for addressing fundamental
evolutionary biology questions that have not been fully resolved using traditional methods …

The future of Baltic Sea populations: local extinction or evolutionary rescue?

K Johannesson, K Smolarz, M Grahn, C André - Ambio, 2011 - Springer
Environmental change challenges local and global survival of populations and species. In a
species-poor environment like the Baltic Sea this is particularly critical as major ecosystem …

Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

S Lamichhaney, AM Barrio, N Rafati… - Proceedings of the …, 2012 - National Acad Sciences
The Atlantic herring (Clupea harengus), one of the most abundant marine fishes in the
world, has historically been a critical food source in Northern Europe. It is one of the few …

The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing

A Martinez Barrio, S Lamichhaney, G Fan, N Rafati… - elife, 2016 - elifesciences.org
Ecological adaptation is of major relevance to speciation and sustainable population
management, but the underlying genetic factors are typically hard to study in natural …

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

ME Pettersson, CM Rochus, F Han, J Chen… - Genome …, 2019 - genome.cshlp.org
The Atlantic herring is a model species for exploring the genetic basis for ecological
adaptation, due to its huge population size and extremely low genetic differentiation at …

Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci

F Han, M Jamsandekar, ME Pettersson, L Su… - Elife, 2020 - elifesciences.org
Atlantic herring is widespread in North Atlantic and adjacent waters and is one of the most
abundant vertebrates on earth. This species is well suited to explore genetic adaptation due …

Population genomic evidence for adaptive differentiation in the Baltic Sea herring

B Guo, Z Li, J Merilä - Molecular ecology, 2016 - Wiley Online Library
Detecting and estimating the degree of genetic differentiation among populations of highly
mobile marine fish having pelagic larval stages is challenging because their effective …

Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci

C André, LC Larsson, L Laikre, D Bekkevold, J Brigham… - Heredity, 2011 - nature.com
In many marine fish species, genetic population structure is typically weak because
populations are large, evolutionarily young and have a high potential for gene flow. We …

Microsatellites as molecular markers with applications in exploitation and conservation of aquatic animal populations

R Wenne - Genes, 2023 - mdpi.com
A large number of species and taxa have been studied for genetic polymorphism.
Microsatellites have been known as hypervariable neutral molecular markers with the …

Oceanographic connectivity and environmental correlates of genetic structuring in Atlantic herring in the Baltic Sea

AGF Teacher, C André, PR Jonsson… - Evolutionary …, 2013 - Wiley Online Library
Marine fish often show little genetic structuring in neutral marker genes, and Atlantic herring
(Clupea harengus) in the Baltic Sea are no exception; historically, very low levels of …