[HTML][HTML] The ONIOM method and its applications
The fields of theoretical and computational chemistry have come a long way since their
inception in the mid-20th century. Fifty years ago, only rudimentary approximations for very …
inception in the mid-20th century. Fifty years ago, only rudimentary approximations for very …
Cyclin-dependent kinase-2 as a target for cancer therapy: progress in the development of CDK2 inhibitors as anti-cancer agents
TA Chohan, H Qian, Y Pan… - Current medicinal …, 2015 - ingentaconnect.com
Cyclin-dependent kinase-2 (CDK2) is a member of protein kinase family. It plays an
important role in regulating various events of eukaryotic cell division cycle. Accumulated …
important role in regulating various events of eukaryotic cell division cycle. Accumulated …
Is it reliable to take the molecular docking top scoring position as the best solution without considering available structural data?
Molecular docking is the most frequently used computational method for studying the
interactions between organic molecules and biological macromolecules. In this context …
interactions between organic molecules and biological macromolecules. In this context …
Extra precision docking, free energy calculation and molecular dynamics simulation studies of CDK2 inhibitors
Molecular docking, free energy calculation and molecular dynamics (MD) simulation studies
have been performed, to explore the putative binding modes of 3, 5-diaminoindazoles …
have been performed, to explore the putative binding modes of 3, 5-diaminoindazoles …
Fluorine Bonding How Does It Work In Protein− Ligand Interactions?
P Zhou, J Zou, F Tian, Z Shang - Journal of chemical information …, 2009 - ACS Publications
Although fluorination of pharmacologically active compounds has long been a common
strategy to increase their metabolic stability and membrane permeation, the functionality of …
strategy to increase their metabolic stability and membrane permeation, the functionality of …
The latest automated docking technologies for novel drug discovery
J Caballero - Expert opinion on drug discovery, 2021 - Taylor & Francis
Introduction Molecular docking has been consolidated as one of the most important methods
in the molecular modeling field. It has been recognized as a prominent tool in the study of …
in the molecular modeling field. It has been recognized as a prominent tool in the study of …
Molecular modeling studies to characterize N-phenylpyrimidin-2-amine selectivity for CDK2 and CDK4 through 3D-QSAR and molecular dynamics simulations
TA Chohan, JJ Chen, HY Qian, YL Pan… - Molecular …, 2016 - pubs.rsc.org
CDK2 is a promising target for the development of anti-cancer agents. It is not an easy task
to design CDK2-selective inhibitors which do not exhibit activity for other CDK family …
to design CDK2-selective inhibitors which do not exhibit activity for other CDK family …
Recent advances on CDK inhibitors: An insight by means of in silico methods
M Tutone, AM Almerico - European Journal of Medicinal Chemistry, 2017 - Elsevier
The cyclin dependent kinases (CDKs) are a small family of serine/threonine protein kinases
that can act as a potential therapeutic target in several proliferative diseases, including …
that can act as a potential therapeutic target in several proliferative diseases, including …
Computational modelling of nanotube delivery of anti-cancer drug into glutathione reductase enzyme
Density functional theory method combined with docking and molecular dynamics
simulations are used to understand the interaction of carmustine with human glutathione …
simulations are used to understand the interaction of carmustine with human glutathione …
Halogen–water–hydrogen bridges in biomolecules
P Zhou, J Lv, J Zou, F Tian, Z Shang - Journal of structural biology, 2010 - Elsevier
The importance of water in biological systems has long been recognized in chemistry and
biology communities. In this article we describe a new manner by which water affects …
biology communities. In this article we describe a new manner by which water affects …