Bioinformatics and its applications in plant biology

SY Rhee, J Dickerson, D Xu - Annu. Rev. Plant Biol., 2006 - annualreviews.org
Bioinformatics plays an essential role in today's plant science. As the amount of data grows
exponentially, there is a parallel growth in the demand for tools and methods in data …

CRISPR/Cas9: a powerful tool in colorectal cancer research

Y Hu, L Liu, Q Jiang, W Fang, Y Chen, Y Hong… - Journal of Experimental …, 2023 - Springer
Colorectal cancer (CRC) is one of the most common malignant cancers worldwide and
seriously threatens human health. The clustered regulatory interspaced short palindromic …

The Ensembl analysis pipeline

SC Potter, L Clarke, V Curwen, S Keenan… - Genome …, 2004 - genome.cshlp.org
The Ensembl pipeline is an extension to the Ensembl system which allows automated
annotation of genomic sequence. The software comprises two parts. First, there is a set of …

Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex

B Negre, S Casillas, M Suzanne… - Genome …, 2005 - genome.cshlp.org
Homeotic (Hox) genes are usually clustered and arranged in the same order as they are
expressed along the anteroposterior body axis of metazoans. The mechanistic explanation …

Origin, distribution, and function of three frequent coding polymorphisms in the gene for the human P2X7 ion channel

W Schäfer, T Stähler, C Pinto Espinoza… - Frontiers in …, 2022 - frontiersin.org
P2X7, an ion channel gated by extracellular ATP, is widely expressed on the plasma
membrane of immune cells and plays important roles in inflammation and apoptosis …

Bioinformatics: a way forward to explore “plant omics”

TS Mehboob-ur-Rahman… - Bioinformatics …, 2016 - books.google.com
Bioinformatics, a computer-assisted science aiming at managing a huge volume of genomic
data, is an emerging discipline that combines the power of computers, mathematical …

Quail Genomics: a knowledgebase for Northern bobwhite

A Rawat, KA Gust, MO Elasri, EJ Perkins - BMC bioinformatics, 2010 - Springer
Abstract Background The Quail Genomics knowledgebase (http://www. quailgenomics. info)
has been initiated to share and develop functional genomic data for Northern bobwhite …

Gene prediction using deep learning

PVL Martins - 2018 - search.proquest.com
Every living being has in their cells complex molecules called Deoxyribonucleic Acid (or
DNA) which are responsible for all their biological features. This DNA molecule is …

The GATO gene annotation tool for research laboratories

A Fujita, KB Massirer, AM Durham… - Brazilian journal of …, 2005 - SciELO Brasil
Large-scale genome projects have generated a rapidly increasing number of DNA
sequences. Therefore, development of computational methods to rapidly analyze these …

[PDF][PDF] The Ensembl Analysis Pipeline

RS Stabenau, M Clamp - Genome Research, 2004 - semmelweis.hu
The Ensembl pipeline is an extension to the Ensembl system which allows automated
annotation of genomic sequence. The software comprises two parts. First, there is a set of …