Opening the Trojan horse: phylogeny of Astyanax, two new genera and resurrection of Psalidodon (Teleostei: Characidae)

GE Terán, MF Benitez… - Zoological Journal of the …, 2020 - academic.oup.com
The freshwater fish genus Astyanax is one of the most diverse among the Characidae. The
genus is defined by a combination of character states that are widely distributed in …

[HTML][HTML] Aquatic organisms research with DNA barcodes

M Elias-Gutierrez, N Hubert, RA Collins… - Diversity, 2021 - mdpi.com
Since their inception, DNA barcodes have become a powerful tool for understanding the
biodiversity and biology of aquatic species, with multiple applications in diverse fields such …

SPdel: A pipeline to compare and visualize species delimitation methods for single‐locus datasets

JL Ramirez, P Valdivia… - Molecular Ecology …, 2023 - Wiley Online Library
An accurate species delimitation is critical for biological studies. In this context, the use of
molecular techniques along with species delimitation methods would help to a rapid and …

DNA barcodes successfully delimit morphospecies in a superdiverse insect genus

C Song, XL Lin, Q Wang, XH Wang - Zoologica Scripta, 2018 - Wiley Online Library
Polypedilum Kieffer (Diptera: Chironomidae), with 520 currently known species worldwide,
can be extremely difficult to identify species level based on the morphology. We used 3,670 …

Phylogenomics of Characidae, a hyper-diverse Neotropical freshwater fish lineage, with a phylogenetic classification including four families (Teleostei: Characiformes)

BF Melo, RP Ota, RC Benine… - Zoological Journal of …, 2024 - academic.oup.com
Neotropical tetras of the family Characidae form the largest and most taxonomically complex
clade within the order Characiformes. Previous phylogenetic relationships concur on the …

DNA barcoding of pygmy hoppers—the first comprehensive overview of the BOLD Systems' Data Shows Promise for Species Identification

N Kasalo, J Skejo, M Husemann - Diversity, 2023 - mdpi.com
The COI gene is widely used as a DNA barcode in animals that can assist in the
identification of species. One of the widely used aggregators of DNA barcodes is the …

Using eDNA to biomonitor the fish community in a tropical oligotrophic lake

M Valdez-Moreno, NV Ivanova, M Elías-Gutiérrez… - Plos one, 2019 - journals.plos.org
Environmental DNA (eDNA) is an effective approach for detecting vertebrates and plants,
especially in aquatic ecosystems, but prior studies have largely examined eDNA in cool …

Bayesian species identification under the multispecies coalescent provides significant improvements to DNA barcoding analyses

Z Yang, B Rannala - Molecular Ecology, 2017 - Wiley Online Library
DNA barcoding methods use a single locus (usually the mitochondrial COI gene) to assign
unidentified specimens to known species in a library based on a genetic distance threshold …

High-throughput analysis unveils a highly shared satellite DNA library among three species of fish genus Astyanax

DMZA Silva, R Utsunomia, FJ Ruiz-Ruano… - Scientific Reports, 2017 - nature.com
The high-throughput analysis of satellite DNA (satDNA) content, by means of Illumina
sequencing, unveiled 45 satDNA families in the genome of Astyanax paranae, with repeat …

Seasonal feeding plasticity can facilitate coexistence of dominant omnivores in Neotropical streams

MP Neves, P Kratina, RL Delariva, JI Jones… - Reviews in Fish Biology …, 2021 - Springer
Coexistence of ecomorphologically similar species in diverse Neotropical ecosystems has
been a focus of long-term debate among ecologists and evolutionary biologists. Such …