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A survey on annotation tools for the biomedical literature
New approaches to biomedical text mining crucially depend on the existence of
comprehensive annotated corpora. Such corpora, commonly called gold standards, are …
comprehensive annotated corpora. Such corpora, commonly called gold standards, are …
Event-based text mining for biology and functional genomics
The assessment of genome function requires a map** between genome-derived entities
and biochemical reactions, and the biomedical literature represents a rich source of …
and biochemical reactions, and the biomedical literature represents a rich source of …
DeepEventMine: end-to-end neural nested event extraction from biomedical texts
Motivation Recent neural approaches on event extraction from text mainly focus on flat
events in general domain, while there are less attempts to detect nested and overlap** …
events in general domain, while there are less attempts to detect nested and overlap** …
[كتاب][B] Healthcare data analytics
CK Reddy, CC Aggarwal - 2015 - books.google.com
Supplying a comprehensive overview of healthcare analytics research, Healthcare Data
Analytics provides an understanding of the analytical techniques currently available to solve …
Analytics provides an understanding of the analytical techniques currently available to solve …
Event extraction across multiple levels of biological organization
Motivation: Event extraction using expressive structured representations has been a
significant focus of recent efforts in biomedical information extraction. However, event …
significant focus of recent efforts in biomedical information extraction. However, event …
Overview of the cancer genetics and pathway curation tasks of bionlp shared task 2013
Background Since their introduction in 2009, the BioNLP Shared Task events have been
instrumental in advancing the development of methods and resources for the automatic …
instrumental in advancing the development of methods and resources for the automatic …
Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011
We present the preparation, resources, results and analysis of three tasks of the BioNLP
Shared Task 2011: the main tasks on Infectious Diseases (ID) and Epigenetics and Post …
Shared Task 2011: the main tasks on Infectious Diseases (ID) and Epigenetics and Post …
Large-scale event extraction from literature with multi-level gene normalization
Text mining for the life sciences aims to aid database curation, knowledge summarization
and information retrieval through the automated processing of biomedical texts. To provide …
and information retrieval through the automated processing of biomedical texts. To provide …
Boosting automatic event extraction from the literature using domain adaptation and coreference resolution
Motivation: In recent years, several biomedical event extraction (EE) systems have been
developed. However, the nature of the annotated training corpora, as well as the training …
developed. However, the nature of the annotated training corpora, as well as the training …
[HTML][HTML] Transfer learning for named entity recognition in financial and biomedical documents
Recent deep learning approaches have shown promising results for named entity
recognition (NER). A reasonable assumption for training robust deep learning models is that …
recognition (NER). A reasonable assumption for training robust deep learning models is that …