Electrochemical biosensors for pathogen detection

E Cesewski, BN Johnson - Biosensors and Bioelectronics, 2020 - Elsevier
Recent advances in electrochemical biosensors for pathogen detection are reviewed.
Electrochemical biosensors for pathogen detection are broadly reviewed in terms of …

Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance

AM Piper, J Batovska, NOI Cogan, J Weiss… - …, 2019 - academic.oup.com
Trap-based surveillance strategies are widely used for monitoring of invasive insect species,
aiming to detect newly arrived exotic taxa as well as track the population levels of …

Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples

E Buetas, M Jordán-López, A López-Roldán, G D'Auria… - BMC genomics, 2024 - Springer
Background Sequencing variable regions of the 16S rRNA gene (≃ 300 bp) with Illumina
technology is commonly used to study the composition of human microbiota. Unfortunately …

Toward quantitative metabarcoding

AO Shelton, ZJ Gold, AJ Jensen, ED′ Agnese… - Ecology, 2023 - Wiley Online Library
Amplicon‐sequence data from environmental DNA (eDNA) and microbiome studies provide
important information for ecology, conservation, management, and health. At present …

Chromosomal barcodes for simultaneous tracking of near-isogenic bacterial strains in plant microbiota

J Ordon, J Thouin, RT Nakano, KW Ma, P Zhang… - Nature …, 2024 - nature.com
DNA-amplicon-based microbiota profiling can estimate species diversity and abundance but
cannot resolve genetic differences within individuals of the same species. Here we report …

[HTML][HTML] Electrochemical biosensors for pathogen detection: An updated review

M Banakar, M Hamidi, Z Khurshid, MS Zafar, J Sapkota… - Biosensors, 2022 - mdpi.com
Electrochemical biosensors are a family of biosensors that use an electrochemical
transducer to perform their functions. In recent decades, many electrochemical biosensors …

[HTML][HTML] Naught all zeros in sequence count data are the same

JD Silverman, K Roche, S Mukherjee… - Computational and …, 2020 - Elsevier
Genomic studies feature multivariate count data from high-throughput DNA sequencing
experiments, which often contain many zero values. These zeros can cause artifacts for …

Electrochemical investigations for COVID-19 detection-A comparison with other viral detection methods

SD Bukkitgar, NP Shetti, TM Aminabhavi - Chemical Engineering Journal, 2021 - Elsevier
Virus-induced infection such as SARS-CoV-2 is a serious threat to human health and the
economic setback of the world. Continued advances in the development of technologies are …

The skin microbiome: current techniques, challenges, and future directions

TM Santiago-Rodriguez, B Le François, JM Macklaim… - Microorganisms, 2023 - mdpi.com
Skin acts as a barrier that promotes the colonization of bacteria, fungi, archaea, and viruses
whose membership and function may differ depending on the various specialized niches or …

Extracting abundance information from DNA‐based data

M Luo, Y Ji, D Warton, DW Yu - Molecular Ecology Resources, 2023 - Wiley Online Library
The accurate extraction of species‐abundance information from DNA‐based data
(metabarcoding, metagenomics) could contribute usefully to diet analysis and food‐web …