[HTML][HTML] Lipids on the move: simulations of membrane pores, domains, stalks and curves
SJ Marrink, AH De Vries, DP Tieleman - Biochimica et Biophysica Acta …, 2009 - Elsevier
In this review we describe the state-of-the-art of computer simulations studies of lipid
membranes. We focus on collective lipid–lipid and lipid–protein interactions that trigger …
membranes. We focus on collective lipid–lipid and lipid–protein interactions that trigger …
Theoretical modeling and simulations of self-assembly of copolymers in solution
Self-assembly of copolymers in solution is a promising way to prepare novel materials. An
accurate control over the self-assembly of copolymers in solution requires a profound …
accurate control over the self-assembly of copolymers in solution requires a profound …
A boundary integral method for simulating the dynamics of inextensible vesicles suspended in a viscous fluid in 2D
We present a new method for the evolution of inextensible vesicles immersed in a Stokesian
fluid. We use a boundary integral formulation for the fluid that results in a set of nonlinear …
fluid. We use a boundary integral formulation for the fluid that results in a set of nonlinear …
Pearling of lipid vesicles induced by nanoparticles
We show that cationic nanoparticles encapsulated within vesicles of phosphocholine lipid
can induce pearling. The dynamic process occurs as two stages: formation of tubular …
can induce pearling. The dynamic process occurs as two stages: formation of tubular …
Polymersomes in Drug Delivery─ From Experiment to Computational Modeling
Q Xu, Y Wang, Y Zheng, Y Zhu, Z Li, Y Liu… - …, 2023 - ACS Publications
Polymersomes, composed of amphiphilic block copolymers, are self-assembled vesicles
that have gained attention as potential drug delivery systems due to their good …
that have gained attention as potential drug delivery systems due to their good …
Approximate modeling of spherical membranes
P Koskinen, OO Kit - Physical Review B—Condensed Matter and Materials …, 2010 - APS
Spherical symmetry is ubiquitous in nature. It is therefore unfortunate that simulation of
spherical systems is so hard and require complete spheres with millions of interacting …
spherical systems is so hard and require complete spheres with millions of interacting …
Lipids and lipid modifications in the regulation of membrane traffic
V Haucke, G Di Paolo - Current opinion in cell biology, 2007 - Elsevier
Lipids play a multitude of roles in intracellular protein transport and membrane traffic. While
a large body of data implicates phosphoinositides in these processes, much less is known …
a large body of data implicates phosphoinositides in these processes, much less is known …
Shocker─ A Molecular Dynamics Protocol and Tool for Accelerating and Analyzing the Effects of Osmotic Shocks
MPA van Tilburg, SJ Marrink, M König… - Journal of Chemical …, 2023 - ACS Publications
The process of osmosis, a fundamental phenomenon in life, drives water through a
semipermeable membrane in response to a solute concentration gradient across this …
semipermeable membrane in response to a solute concentration gradient across this …
Shape deformation, budding and division of giant vesicles and artificial cells: A review
The understanding of the shape-change dynamics leading to the budding and division of
artificial cells has gained much attention in the past few decades due to an increased …
artificial cells has gained much attention in the past few decades due to an increased …
Isogeometric analysis for a phase-field constrained optimization problem of morphological evolution of vesicles in electrical fields
In this paper, we solve a constrained Willmore problem coupled with an electrical field using
IsoGeometric Analysis (IGA) to simulate the morphological evolution of vesicles subjected to …
IsoGeometric Analysis (IGA) to simulate the morphological evolution of vesicles subjected to …