Global genetic networks and the genotype-to-phenotype relationship

M Costanzo, E Kuzmin, J van Leeuwen, B Mair… - Cell, 2019 - cell.com
Genetic interactions identify combinations of genetic variants that im**e on phenotype.
With whole-genome sequence information available for thousands of individuals within a …

Genetic assimilation: a review of its potential proximate causes and evolutionary consequences

IM Ehrenreich, DW Pfennig - Annals of botany, 2016 - academic.oup.com
Background Most, if not all, organisms possess the ability to alter their phenotype in direct
response to changes in their environment, a phenomenon known as phenotypic plasticity …

Systematic analysis of complex genetic interactions

E Kuzmin, B VanderSluis, W Wang, G Tan… - Science, 2018 - science.org
INTRODUCTION Genetic interactions occur when mutations in different genes combine to
result in a phenotype that is different from expectation based on those of the individual …

The interplay of additivity, dominance, and epistasis on fitness in a diploid yeast cross

T Matsui, MN Mullis, KR Roy, JJ Hale, R Schell… - Nature …, 2022 - nature.com
In diploid species, genetic loci can show additive, dominance, and epistatic effects. To
characterize the contributions of these different types of genetic effects to heritable traits, we …

Higher-order genetic interactions and their contribution to complex traits

MB Taylor, IM Ehrenreich - Trends in genetics, 2015 - cell.com
The contribution of genetic interactions involving three or more loci to complex traits is poorly
understood. These higher-order genetic interactions (HGIs) are difficult to detect in genetic …

The contributions of 'diet','genes', and physical activity to the etiology of obesity: contrary evidence and consilience

E Archer, CJ Lavie, JO Hill - Progress in Cardiovascular Diseases, 2018 - Elsevier
The debate on the relative contributions of presumptive etiologic factors in the development
of obesity is becoming increasingly speculative, insular, and partisan. As the global …

The complex underpinnings of genetic background effects

MN Mullis, T Matsui, R Schell, R Foree… - Nature …, 2018 - nature.com
Genetic interactions between mutations and standing polymorphisms can cause mutations
to show distinct phenotypic effects in different individuals. To characterize the genetic …

A topological approach unveils system invariances and broken symmetries in the brain

A Tozzi, JF Peters - Journal of Neuroscience Research, 2016 - Wiley Online Library
Symmetries are widespread invariances underscoring countless systems, including the
brain. A symmetry break occurs when the symmetry is present at one level of observation but …

Experimental evolution reveals favored adaptive routes to cell aggregation in yeast

EA Hope, CJ Amorosi, AW Miller, K Dang, CS Heil… - Genetics, 2017 - academic.oup.com
Yeast flocculation is a community-building cell aggregation trait that is an important
mechanism of stress resistance and a useful phenotype for brewers; however, it is also a …

One hundred years of statistical developments in animal breeding

D Gianola, GJM Rosa - Annu. Rev. Anim. Biosci., 2015 - annualreviews.org
Statistical methodology has played a key role in scientific animal breeding. Approximately
one hundred years of statistical developments in animal breeding are reviewed. Some of the …