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Past, present and future of the boundaries of the Pseudomonas genus: proposal of Stutzerimonas gen. nov
Pseudomonas is one the best studied bacterial genera, and it is the genus with the highest
number of species among the gram-negative bacteria. Pseudomonas spp. are widely …
number of species among the gram-negative bacteria. Pseudomonas spp. are widely …
Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas
Endozoicomonas bacteria are emerging as extremely diverse and flexible symbionts of
numerous marine hosts inhabiting oceans worldwide. Their hosts range from simple …
numerous marine hosts inhabiting oceans worldwide. Their hosts range from simple …
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently
available microbial genomes. This is being addressed by advances in sequencing …
available microbial genomes. This is being addressed by advances in sequencing …
Genomics in Bacterial Taxonomy: Impact on the Genus Pseudomonas
The introduction of genomics is profoundly changing current bacterial taxonomy.
Phylogenomics provides accurate methods for delineating species and allows us to infer the …
Phylogenomics provides accurate methods for delineating species and allows us to infer the …
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
We present 1,003 reference genomes that were sequenced as part of the Genomic
Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence …
Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence …
A post-genomic view of the ecophysiology, catabolism and biotechnological relevance of sulphate-reducing prokaryotes
R Rabus, SS Venceslau, L Wöhlbrand… - Advances in microbial …, 2015 - Elsevier
Dissimilatory sulphate reduction is the unifying and defining trait of sulphate-reducing
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
The Genomes OnLine Database (GOLD) v. 5: a metadata management system based on a four level (meta) genome project classification
TBK Reddy, AD Thomas, D Stamatis… - Nucleic acids …, 2015 - academic.oup.com
Abstract The Genomes OnLine Database (GOLD; http://www. genomesonline. org) is a
comprehensive online resource to catalog and monitor genetic studies worldwide. GOLD …
comprehensive online resource to catalog and monitor genetic studies worldwide. GOLD …
Genome‐based evolutionary history of Pseudomonas spp
Pseudomonas is a large and diverse genus of Gammaproteobacteria. To provide a
framework for discovery of evolutionary and taxonomic relationships of these bacteria, we …
framework for discovery of evolutionary and taxonomic relationships of these bacteria, we …
Genomes OnLine Database (GOLD) v. 6: data updates and feature enhancements
S Mukherjee, D Stamatis, J Bertsch… - Nucleic acids …, 2016 - academic.oup.com
Abstract The Genomes Online Database (GOLD)(https://gold. jgi. doe. gov) is a manually
curated data management system that catalogs sequencing projects with associated …
curated data management system that catalogs sequencing projects with associated …
Firefly genomes illuminate parallel origins of bioluminescence in beetles
Fireflies and their luminous courtships have inspired centuries of scientific study. Today
firefly luciferase is widely used in biotechnology, but the evolutionary origin of …
firefly luciferase is widely used in biotechnology, but the evolutionary origin of …