In this topical review we consider stochastic processes under resetting, which have attracted
a lot of attention in recent years. We begin with the simple example of a diffusive particle …

Living systems operate far from thermodynamic equilibrium. Enzymatic activity can induce
broken detailed balance at the molecular scale. This molecular scale breaking of detailed …

Biomolecular systems like molecular motors or pumps, transcription and translation
machinery, and other enzymatic reactions, can be described as Markov processes on a …

We build a rigorous nonequilibrium thermodynamic description for open chemical reaction
networks of elementary reactions. Their dynamics is described by deterministic rate …

In this essay I will sketch some ideas for how to think about models in biology. I will begin by
trying to dispel the myth that quantitative modeling is somehow foreign to biology. I will then …

Living things benefit from exquisite molecular sensitivity in many of their key processes,
including DNA replication, transcription and translation, chemical sensing, and …

Biomolecular machines are protein complexes that convert between different forms of free
energy. They are utilized in nature to accomplish many cellular tasks. As isothermal …

Over the last two decades ratchet mechanisms have transformed the understanding and
design of stochastic molecular systems—biological, chemical and physical—in a move away …

All eukaryotic cells contain four RNA polymerases originally defined by their sensitivity to
different drugs, and now by the sets of genes they transcribe. 1− 4 Polymerase I produces …

Full article: Martingales for physicists: a treatise on stochastic thermodynamics and beyond
Skip to Main Content Taylor and Francis Online homepage Browse Search Publish Login …