Approximate bayesian computation

MA Beaumont - Annual review of statistics and its application, 2019‏ - annualreviews.org
Many of the statistical models that could provide an accurate, interesting, and testable
explanation for the structure of a data set turn out to have intractable likelihood functions …

Fundamentals and recent developments in approximate Bayesian computation

J Lintusaari, MU Gutmann, R Dutta, S Kaski… - Systematic …, 2017‏ - academic.oup.com
Bayesian inference plays an important role in phylogenetics, evolutionary biology, and in
many other branches of science. It provides a principled framework for dealing with …

SBI--A toolkit for simulation-based inference

A Tejero-Cantero, J Boelts, M Deistler… - arxiv preprint arxiv …, 2020‏ - arxiv.org
Scientists and engineers employ stochastic numerical simulators to model empirically
observed phenomena. In contrast to purely statistical models, simulators express scientific …

[ספר][B] Handbook of approximate Bayesian computation

SA Sisson, Y Fan, M Beaumont - 2018‏ - books.google.com
As the world becomes increasingly complex, so do the statistical models required to analyse
the challenging problems ahead. For the very first time in a single volume, the Handbook of …

Convolutional neural network for seismic impedance inversion

V Das, A Pollack, U Wollner, T Mukerji - Geophysics, 2019‏ - library.seg.org
We have addressed the geophysical problem of obtaining an elastic model of the
subsurface from recorded normal-incidence seismic data using convolutional neural …

Automatic posterior transformation for likelihood-free inference

D Greenberg, M Nonnenmacher… - … conference on machine …, 2019‏ - proceedings.mlr.press
How can one perform Bayesian inference on stochastic simulators with intractable
likelihoods? A recent approach is to learn the posterior from adaptively proposed …

Benchmarking simulation-based inference

JM Lueckmann, J Boelts, D Greenberg… - International …, 2021‏ - proceedings.mlr.press
Recent advances in probabilistic modelling have led to a large number of simulation-based
inference algorithms which do not require numerical evaluation of likelihoods. However, a …

Sequential neural likelihood: Fast likelihood-free inference with autoregressive flows

G Papamakarios, D Sterratt… - The 22nd international …, 2019‏ - proceedings.mlr.press
Abstract We present Sequential Neural Likelihood (SNL), a new method for Bayesian
inference in simulator models, where the likelihood is intractable but simulating data from …

Training deep neural density estimators to identify mechanistic models of neural dynamics

PJ Gonçalves, JM Lueckmann, M Deistler… - elife, 2020‏ - elifesciences.org
Mechanistic modeling in neuroscience aims to explain observed phenomena in terms of
underlying causes. However, determining which model parameters agree with complex and …

Field-level simulation-based inference of galaxy clustering with convolutional neural networks

P Lemos, L Parker, CH Hahn, S Ho, M Eickenberg… - Physical Review D, 2024‏ - APS
We present the first simulation-based inference (SBI) of cosmological parameters from field-
level analysis of galaxy clustering. Standard galaxy clustering analyses rely on analyzing …