Many vocabularies and ontologies are produced to represent and annotate agronomic data.
However, those ontologies are spread out, in different formats, of different size, with different …

Motivation: There exist few simple and easily accessible methods to integrate ontologies
programmatically in the R environment. We present ontoCAT—an R package to access …

Motivation To evaluate how well current anatomical ontologies fit the way real-world users
apply anatomy terms in their data annotations. Methods Annotations from three diverse multi …

Package can load the ontology from a local file or on the fly from a URL and internally create
the inferred ontology view. Experimental Factor Ontology (EFO) is the default ontology …

The ontoCAT package:• gives unified, format-independent access to ontology terms and the
ontology hierarchy represented in OWL and OBO formats;• provides basic methods for …

The ontoCAT package provides a simple interface to the Experimental Factor Ontology
(http://www. ebi. ac. uk/efo) and to any other ontology described in OWL or OBO format …