Strategies to access biosynthetic novelty in bacterial genomes for drug discovery

F Hemmerling, J Piel - Nature Reviews Drug Discovery, 2022 - nature.com
Bacteria provide a rich source of natural products with potential therapeutic applications,
such as novel antibiotic classes or anticancer drugs. Bioactivity-guided screening of …

Evolution and diversity of assembly-line polyketide synthases: focus review

A Nivina, KP Yuet, J Hsu, C Khosla - Chemical reviews, 2019 - ACS Publications
Assembly-line polyketide synthases (PKSs) are among the most complex protein
machineries known in nature, responsible for the biosynthesis of numerous compounds …

The evolution of genome mining in microbes–a review

N Ziemert, M Alanjary, T Weber - Natural product reports, 2016 - pubs.rsc.org
Covering: 2006 to 2016 The computational mining of genomes has become an important
part in the discovery of novel natural products as drug leads. Thousands of bacterial …

Discovery of microbial natural products by activation of silent biosynthetic gene clusters

PJ Rutledge, GL Challis - Nature reviews microbiology, 2015 - nature.com
Microorganisms produce a wealth of structurally diverse specialized metabolites with a
remarkable range of biological activities and a wide variety of applications in medicine and …

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

P Cimermancic, MH Medema, J Claesen, K Kurita… - Cell, 2014 - cell.com
Although biosynthetic gene clusters (BGCs) have been discovered for hundreds of bacterial
metabolites, our knowledge of their diversity remains limited. Here, we used a novel …

Enzymology of assembly line synthesis by modular polyketide synthases

M Grininger - Nature Chemical Biology, 2023 - nature.com
Modular polyketide synthases (PKSs) run catalytic reactions over dozens of steps in a highly
orchestrated manner. To accomplish this synthetic feat, they form megadalton multienzyme …

Defensive symbioses of animals with prokaryotic and eukaryotic microorganisms

LV Flórez, PHW Biedermann, T Engl… - Natural Product …, 2015 - pubs.rsc.org
Covering: through 2014 Many organisms team up with microbes for defense against
predators, parasites, parasitoids, or pathogens. Here we review the described protective …

Evolution-guided engineering of trans-acyltransferase polyketide synthases

MFJ Mabesoone, S Leopold-Messer, HA Minas… - Science, 2024 - science.org
Bacterial multimodular polyketide synthases (PKSs) are giant enzymes that generate a wide
range of therapeutically important but synthetically challenging natural products …

Biosynthesis of polyketides by trans-AT polyketide synthases

EJN Helfrich, J Piel - Natural product reports, 2016 - pubs.rsc.org
Covering 2000 to June 2015 This review discusses the biosynthesis of natural products that
are generated by trans-AT polyketide synthases, a family of catalytically versatile enzymes …

Genomic insights into the marine sponge microbiome

U Hentschel, J Piel, SM Degnan… - Nature Reviews …, 2012 - nature.com
Marine sponges (phylum Porifera) often contain dense and diverse microbial communities,
which can constitute up to 35% of the sponge biomass. The genome of one sponge …