Marine bacterial and archaeal ion-pum** rhodopsins: genetic diversity, physiology, and ecology

J Pinhassi, EF DeLong, O Béjà… - Microbiology and …, 2016 - journals.asm.org
The recognition of a new family of rhodopsins in marine planktonic bacteria, proton-pum**
proteorhodopsin, expanded the known phylogenetic range, environmental distribution, and …

[HTML][HTML] Bacteriorhodopsin: Would the real structural intermediates please stand up?

C Wickstrand, R Dods, A Royant, R Neutze - Biochimica et Biophysica Acta …, 2015 - Elsevier
Background Bacteriorhodopsin (bR) is the simplest known light driven proton pump and has
been heavily studied using structural methods: eighty four X-ray diffraction, six electron …

A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.)

C Rinke, F Rubino, LF Messer, N Youssef… - The ISME …, 2019 - academic.oup.com
Abstract Marine Group II (MGII) archaea represent the most abundant planktonic archaeal
group in ocean surface waters, but our understanding of the group has been limited by a …

Crystal structure of a light-driven sodium pump

I Gushchin, V Shevchenko, V Polovinkin… - Nature structural & …, 2015 - nature.com
Recently, the first known light-driven sodium pumps, from the microbial rhodopsin family,
were discovered. We have solved the structure of one of them, Krokinobacter eikastus …

Key roles for freshwater A ctinobacteria revealed by deep metagenomic sequencing

R Ghai, CM Mizuno, A Picazo, A Camacho… - Molecular …, 2014 - Wiley Online Library
Freshwater ecosystems are critical but fragile environments directly affecting society and its
welfare. However, our understanding of genuinely freshwater microbial communities …

Mechanism of transmembrane signaling by sensor histidine kinases

I Gushchin, I Melnikov, V Polovinkin, A Ishchenko… - Science, 2017 - science.org
INTRODUCTION Microorganisms obtain most of the information about their environments
through membrane-associated signaling systems. One of the most abundant classes of …

Inward H+ pump xenorhodopsin: Mechanism and alternative optogenetic approach

V Shevchenko, T Mager, K Kovalev, V Polovinkin… - Science …, 2017 - science.org
Generation of an electrochemical proton gradient is the first step of cell bioenergetics. In
prokaryotes, the gradient is created by outward membrane protein proton pumps. Inward …

Structure and mechanisms of sodium-pum** KR2 rhodopsin

K Kovalev, V Polovinkin, I Gushchin, A Alekseev… - Science …, 2019 - science.org
Rhodopsins are the most universal biological light-energy transducers and abundant
phototrophic mechanisms that evolved on Earth and have a remarkable diversity and …

Molecular mechanism of light-driven sodium pum**

K Kovalev, R Astashkin, I Gushchin, P Orekhov… - Nature …, 2020 - nature.com
The light-driven sodium-pum** rhodopsin KR2 from Krokinobacter eikastus is the only
non-proton cation active transporter with demonstrated potential for optogenetics. However …

High-resolution structural insights into the heliorhodopsin family

K Kovalev, D Volkov, R Astashkin, A Alekseev… - Proceedings of the …, 2020 - pnas.org
Rhodopsins are the most abundant light-harvesting proteins. A new family of rhodopsins,
heliorhodopsins (HeRs), has recently been discovered. Unlike in the known rhodopsins, in …