Machine learning for chemical reactions
M Meuwly - Chemical Reviews, 2021 - ACS Publications
Machine learning (ML) techniques applied to chemical reactions have a long history. The
present contribution discusses applications ranging from small molecule reaction dynamics …
present contribution discusses applications ranging from small molecule reaction dynamics …
CHARMM at 45: Enhancements in accessibility, functionality, and speed
Since its inception nearly a half century ago, CHARMM has been playing a central role in
computational biochemistry and biophysics. Commensurate with the developments in …
computational biochemistry and biophysics. Commensurate with the developments in …
Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation
Combustion is a complex chemical system which involves thousands of chemical reactions
and generates hundreds of molecular species and radicals during the process. In this work …
and generates hundreds of molecular species and radicals during the process. In this work …
Neural network potentials for chemistry: concepts, applications and prospects
Artificial Neural Networks (NN) are already heavily involved in methods and applications for
frequent tasks in the field of computational chemistry such as representation of potential …
frequent tasks in the field of computational chemistry such as representation of potential …
Long-range versus short-range effects in cold molecular ion-neutral collisions
The investigation of cold interactions between ions and neutrals has recently emerged as a
new scientific frontier at the interface of physics and chemistry. Here, we report a study of …
new scientific frontier at the interface of physics and chemistry. Here, we report a study of …
High-dimensional potential energy surfaces for molecular simulations: from empiricism to machine learning
An overview of computational methods to describe high-dimensional potential energy
surfaces suitable for atomistic simulations is given. Particular emphasis is put on accuracy …
surfaces suitable for atomistic simulations is given. Particular emphasis is put on accuracy …
Bayesian machine learning approach to the quantification of uncertainties on ab initio potential energy surfaces
This work introduces a novel methodology for the quantification of uncertainties associated
with potential energy surfaces (PESs) computed from first-principles quantum mechanical …
with potential energy surfaces (PESs) computed from first-principles quantum mechanical …
Exploring the chemical space of linear alkane pyrolysis via deep potential generator
Reactive molecular dynamics (MD) simulation is a powerful tool to study the reaction
mechanism of complex chemical systems. Central to the method is the potential energy …
mechanism of complex chemical systems. Central to the method is the potential energy …
Permutationally invariant, reproducing kernel-based potential energy surfaces for polyatomic molecules: From formaldehyde to acetone
Constructing accurate, high-dimensional molecular potential energy surfaces (PESs) for
polyatomic molecules is challenging. Reproducing kernel Hilbert space (RKHS) …
polyatomic molecules is challenging. Reproducing kernel Hilbert space (RKHS) …
Transfer-learned potential energy surfaces: Toward microsecond-scale molecular dynamics simulations in the gas phase at CCSD (T) quality
The rise of machine learning has greatly influenced the field of computational chemistry and
atomistic molecular dynamics simulations in particular. One of its most exciting prospects is …
atomistic molecular dynamics simulations in particular. One of its most exciting prospects is …