A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity

W Guo, M Schreiber, VB Marosi, P Bagnaresi… - Nature Genetics, 2025 - nature.com
A pan-transcriptome describes the transcriptional and post-transcriptional consequences of
genome diversity from multiple individuals within a species. We developed a barley pan …

Barley2035: A decade vision on barley research and breeding

C Jiang, J Kan, G Gao, C Dockter, C Li, W Wu, P Yang… - Molecular Plant, 2024 - cell.com
Barley (Hordeum vulgare ssp. vulgare) is one of the oldest founder crops in early human
civilization, and has been widely dispersed around the globe to supply human life through …

[HTML][HTML] Develo** pangenomes for large and complex plant genomes and their representation formats

P Ruperao, P Rangan, T Shah, V Sharma… - Journal of Advanced …, 2025 - Elsevier
Background The development of pangenomes has revolutionized genomic studies by
capturing the complete genetic diversity within a species. Pangenome assembly integrates …

High-quality phenotypic and genotypic dataset of barley genebank core collection to unlock untapped genetic diversity

Z Yuan, M Rembe, M Mascher, N Stein… - …, 2025 - academic.oup.com
Background Genebanks around the globe serve as valuable repositories of genetic
diversity, offering not only access to a broad spectrum of plant material but also critical …

The 1001G+ project: A curated collection of Arabidopsis thaliana long-read genome assemblies to advance plant research

1001 Genomes Plus Consortium, CC Alonso-Blanco… - bioRxiv, 2024 - biorxiv.org
Arabidopsis thaliana was the first plant for which a high-quality genome sequence became
available. The publication of the first reference genome sequence almost 25 years ago was …