Mitochondrial complex I activity in microglia sustains neuroinflammation

L Peruzzotti-Jametti, CM Willis, G Krzak, R Hamel… - Nature, 2024 - nature.com
Sustained smouldering, or low-grade activation, of myeloid cells is a common hallmark of
several chronic neurological diseases, including multiple sclerosis. Distinct metabolic and …

Drug target prediction through deep learning functional representation of gene signatures

H Chen, FJ King, B Zhou, Y Wang, CJ Canedy… - Nature …, 2024 - nature.com
Many machine learning applications in bioinformatics currently rely on matching gene
identities when analyzing input gene signatures and fail to take advantage of preexisting …

A transcriptomic hourglass in brown algae

JS Lotharukpong, M Zheng, R Luthringer, D Liesner… - Nature, 2024 - nature.com
Complex multicellularity has emerged independently across a few eukaryotic lineages and
is often associated with the rise of elaborate, tightly coordinated developmental processes …

Human pancreatic islet microRNAs implicated in diabetes and related traits by large-scale genetic analysis

HJ Taylor, YH Hung, N Narisu, MR Erdos… - Proceedings of the …, 2023 - pnas.org
Genetic studies have identified≥ 240 loci associated with the risk of type 2 diabetes (T2D),
yet most of these loci lie in non-coding regions, masking the underlying molecular …

[HTML][HTML] Myeloid cell interferon secretion restricts Zika flavivirus infection of develo** and malignant human neural progenitor cells

H Bulstrode, GC Girdler, T Gracia, A Aivazidis… - Neuron, 2022 - cell.com
Zika virus (ZIKV) can infect human develo** brain (HDB) progenitors resulting in epidemic
microcephaly, whereas analogous cellular tropism offers treatment potential for the adult …

Single-Cell RNA Sequencing in Ovarian Cancer: Current Progress and Future Prospects

C Zhi-**ong - Progress in Biophysics and Molecular Biology, 2025 - Elsevier
Ovarian cancer is one of the most prevalent gynaecological malignancies. The rapid
development of single-cell RNA sequencing (scRNA-seq) has allowed scientists to use this …

Proinflammatory cytokines driving cardiotoxicity in COVID-19

M Colzani, J Bargehr, F Mescia… - Cardiovascular …, 2024 - academic.oup.com
Aims Cardiac involvement is common in patients hospitalized with COVID-19 and correlates
with an adverse disease trajectory. While cardiac injury has been attributed to direct viral …

Comparative RNA profiling identifies stage-specific phasiRNAs and coexpressed Argonaute genes in Bambusoideae and Pooideae species

S Bélanger, J Zhan, Y Yu, BC Meyers - The Plant Cell, 2025 - academic.oup.com
Abstract Phased, small interfering RNAs (PhasiRNAs) play a crucial role in supporting male
fertility in grasses. Earlier work in maize (Zea mays) and rice (Oryza sativa)—and …

DeepQA: A Unified Transcriptome‐Based Aging Clock Using Deep Neural Networks

H Qi, H Zhao, E Li, X Lu, N Yu, J Liu, J Han - Aging Cell, 2025 - Wiley Online Library
Understanding the complex biological process of aging is of great value, especially as it can
help develop therapeutics to prolong healthy life. Predicting biological age from gene …

ClustAssess: tools for assessing the robustness of single-cell clustering

A Shahsavari, A Munteanu, I Mohorianu - bioRxiv, 2022 - biorxiv.org
The transition from bulk to single-cell analyses refocused the computational challenges for
high-throughput sequencing data-processing. The core of single-cell pipelines is partitioning …