Standardizing catch and effort data: a review of recent approaches

MN Maunder, AE Punt - Fisheries research, 2004 - Elsevier
The primary indices of abundance for many of the world's most valuable species (eg tunas)
and vulnerable species (eg sharks) are based on catch and effort data collected from …

A review of integrated analysis in fisheries stock assessment

MN Maunder, AE Punt - Fisheries research, 2013 - Elsevier
Limited data, and the requirement to provide science-based advice for exploited
populations, have led to the development of statistical methods that combine several …

AD Model Builder: using automatic differentiation for statistical inference of highly parameterized complex nonlinear models

DA Fournier, HJ Skaug, J Ancheta, J Ianelli… - Optimization Methods …, 2012 - Taylor & Francis
Many criteria for statistical parameter estimation, such as maximum likelihood, are
formulated as a nonlinear optimization problem. Automatic Differentiation Model Builder …

Effects of environmental variables on fish feeding ecology: implications for the performance of baited fishing gear and stock assessment

AW Stoner - Journal of Fish Biology, 2004 - Wiley Online Library
The effectiveness of baited fishing gear ultimately depends upon behaviour of the target
species–activity rhythms, feeding motivation, and sensory and locomotory abilities. While …

Incorporating time-varying catchability into population dynamic stock assessment models

MJ Wilberg, JT Thorson, BC Linton… - Reviews in Fisheries …, 2009 - Taylor & Francis
Catchability is an important parameter in many stock assessment models because it relates
an index of abundance to stock size. We review the theory and evidence for time-varying …

Essential features of the next-generation integrated fisheries stock assessment package: a perspective

AE Punt, A Dunn, BÞ Elvarsson, J Hampton, SD Hoyle… - Fisheries …, 2020 - Elsevier
Integrated analysis (or integrated population modelling) methods have become the
preferred approach for conducting stock assessments, and providing the basis for …

[PDF][PDF] Methods for standardizing CPUE and how to select among them

MG Hinton, MN Maunder - Col. Vol. Sci. Pap. ICCAT, 2004 - Citeseer
Methods for estimating trends in relative abundance based on catch-per-unit-effort (CPUE)
are discussed, including general linear and additive models, habitat-based standardization …

[HTML][HTML] Seasonal distribution and historic trends in abundance of white sharks, Carcharodon carcharias, in the western North Atlantic Ocean

TH Curtis, CT McCandless, JK Carlson, GB Skomal… - PloS one, 2014 - journals.plos.org
Despite recent advances in field research on white sharks (Carcharodon carcharias) in
several regions around the world, opportunistic capture and sighting records remain the …

Influence plots and metrics: tools for better understanding fisheries catch-per-unit-effort standardizations

N Bentley, TH Kendrick, PJ Starr… - ICES Journal of Marine …, 2012 - academic.oup.com
Abstract Bentley, N., Kendrick, TH, Starr, PJ, and Breen, PA 2012. Influence plots and
metrics: tools for better understanding fisheries catch-per-unit-effort standardizations.–ICES …

Climate impacts on albacore and bluefin tunas migrations phenology and spatial distribution

F Dufour, H Arrizabalaga, X Irigoien… - Progress in …, 2010 - Elsevier
North Atlantic albacore and eastern Atlantic bluefin tunas perform feeding migrations to
productive areas of the northeast Atlantic Ocean during the summer. Climate change is likely …