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[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
The genomic revolution has fundamentally changed how we survey biodiversity on earth.
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
DNA metabarcoding is increasingly used for the assessment of aquatic communities, and
numerous studies have investigated the consistency of this technique with traditional …
numerous studies have investigated the consistency of this technique with traditional …
MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples
We reviewed the current methodology and practices of the DNA metabarcoding approach
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive
Assessment of ecological status for the European Water Framework Directive (WFD) is
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
A validation scale to determine the readiness of environmental DNA assays for routine species monitoring
The use of environmental DNA (eDNA) analysis for species monitoring requires rigorous
validation—from field sampling to the analysis of PCR‐based results—for meaningful …
validation—from field sampling to the analysis of PCR‐based results—for meaningful …
Methodology of fish eDNA and its applications in ecology and environment
Fish environmental DNA (eDNA) studies have made substantial progress during the past
decade, and significant advances in monitoring fishes have been gained by taking …
decade, and significant advances in monitoring fishes have been gained by taking …
Assessing strengths and weaknesses of DNA metabarcoding‐based macroinvertebrate identification for routine stream monitoring
DNA metabarcoding holds great promise for the assessment of macroinvertebrates in
stream ecosystems. However, few large‐scale studies have compared the performance of …
stream ecosystems. However, few large‐scale studies have compared the performance of …
The current state of eDNA research in freshwater ecosystems: are we shifting from the developmental phase to standard application in biomonitoring?
T Schenekar - Hydrobiologia, 2023 - Springer
Environmental DNA (eDNA) has seen a massive increase in application in freshwater
systems with a concurrent growth in protocol developments and a drive to gain a better …
systems with a concurrent growth in protocol developments and a drive to gain a better …