Synthetic biology to access and expand nature's chemical diversity
Bacterial genomes encode the biosynthetic potential to produce hundreds of thousands of
complex molecules with diverse applications, from medicine to agriculture and materials …
complex molecules with diverse applications, from medicine to agriculture and materials …
Principles of genetic circuit design
Cells navigate environments, communicate and build complex patterns by initiating gene
expression in response to specific signals. Engineers seek to harness this capability to …
expression in response to specific signals. Engineers seek to harness this capability to …
Continuous evolution of base editors with expanded target compatibility and improved activity
Base editors use DNA-modifying enzymes targeted with a catalytically impaired CRISPR
protein to precisely install point mutations. Here, we develop phage-assisted continuous …
protein to precisely install point mutations. Here, we develop phage-assisted continuous …
Systematic characterization of maturation time of fluorescent proteins in living cells
E Balleza, JM Kim, P Cluzel - Nature methods, 2018 - nature.com
The slow maturation time of fluorescent proteins (FPs) limits the temporal accuracy of
measurements of rapid processes such as gene expression dynamics and effectively …
measurements of rapid processes such as gene expression dynamics and effectively …
Adaptive evolution of virulence and persistence in carbapenem-resistant Klebsiella pneumoniae
Among the most urgent public health threats is the worldwide emergence of carbapenem-
resistant Enterobacteriaceae,,–, which are resistant to the antibiotic class of 'last resort'. In …
resistant Enterobacteriaceae,,–, which are resistant to the antibiotic class of 'last resort'. In …
Precise and reliable gene expression via standard transcription and translation initiation elements
An inability to reliably predict quantitative behaviors for novel combinations of genetic
elements limits the rational engineering of biological systems. We developed an expression …
elements limits the rational engineering of biological systems. We developed an expression …
Two-step pathway for isoprenoid synthesis
Isoprenoids comprise a large class of chemicals of significant interest due to their diverse
properties. Biological production of isoprenoids is considered to be the most efficient way for …
properties. Biological production of isoprenoids is considered to be the most efficient way for …
Genetic circuit design automation for yeast
Cells can be programmed to monitor and react to their environment using genetic circuits.
Design automation software maps a desired circuit function to a DNA sequence, a process …
Design automation software maps a desired circuit function to a DNA sequence, a process …
Synthetic circuits integrating logic and memory in living cells
Logic and memory are essential functions of circuits that generate complex, state-dependent
responses. Here we describe a strategy for efficiently assembling synthetic genetic circuits …
responses. Here we describe a strategy for efficiently assembling synthetic genetic circuits …
Control theory meets synthetic biology
The past several years have witnessed an increased presence of control theoretic concepts
in synthetic biology. This review presents an organized summary of how these control …
in synthetic biology. This review presents an organized summary of how these control …