Artificial intelligence in metabolomics: A current review

J Chi, J Shu, M Li, R Mudappathi, Y **, F Lewis… - TrAC Trends in …, 2024 - Elsevier
Metabolomics and artificial intelligence (AI) form a synergistic partnership. Metabolomics
generates large datasets comprising hundreds to thousands of metabolites with complex …

Quantitative proteomics of cerebrospinal fluid from African Americans and Caucasians reveals shared and divergent changes in Alzheimer's disease

ES Modeste, L **, CM Watson, DM Duong… - Molecular …, 2023 - Springer
Background Despite being twice as likely to get Alzheimer's disease (AD), African
Americans have been grossly underrepresented in AD research. While emerging evidence …

HMGB2 regulates the differentiation and stemness of exhausted CD8+ T cells during chronic viral infection and cancer

EN Neubert, JM DeRogatis, SA Lewis… - Nature …, 2023 - nature.com
Chronic infections and cancers evade the host immune system through mechanisms that
induce T cell exhaustion. The heterogeneity within the exhausted CD8+ T cell pool has …

Multi-omics data integration and modeling unravels new mechanisms for pancreatic cancer and improves prognostic prediction

NA Fraunhoffer, AM Abuelafia, M Bigonnet… - NPJ precision …, 2022 - nature.com
Pancreatic ductal adenocarcinoma (PDAC), has recently been found to be a heterogeneous
disease, although the extension of its diversity remains to be fully understood. Here, we …

An archaeal histone-like protein regulates gene expression in response to salt stress

S Sakrikar, AK Schmid - Nucleic acids research, 2021 - academic.oup.com
Histones, ubiquitous in eukaryotes as DNA-packing proteins, find their evolutionary origins
in archaea. Unlike the characterized histone proteins of a number of methanogenic and …

Triple component matrix factorization: Untangling global, local, and noisy components

N Shi, S Fattahi, R Al Kontar - Journal of Machine Learning Research, 2024 - jmlr.org
In this work, we study the problem of common and unique feature extraction from noisy data.
When we have $ N $ observation matrices from $ N $ different and associated sources …

[HTML][HTML] Evaluating efficiency in water and sewerage services: An integrated DEA approach with DOE and PCA

K Pishini, O Abdolazimi, D Shishebori… - Science of The Total …, 2025 - Elsevier
Evaluating the performance of service organizations like Water and Sewerage companies is
essential for optimal operations, high-quality service, and cost efficiency. This paper …

Transcriptome analyses indicate that heat stress-induced inflammation in white adipose tissue and oxidative stress in skeletal muscle is partially moderated by …

RR Reith, RL Sieck, PC Grijalva… - Journal of animal …, 2022 - academic.oup.com
Heat stress (HS) triggers oxidative stress, systemic inflammation, and disrupts growth
efficiency of livestock. β-adrenergic agonists supplemented to ruminant livestock improve …

Empirical and methodological foundations on the impact of climate-smart agriculture on food security studies

G Tilahun, A Bantider, D Yayeh - Heliyon, 2025 - cell.com
The progress of Ethiopia's agriculture is constrained by climate change leaving smallholder
farmers vulnerable. As a panacea to the challenge, development institutions, governments …

Comprehensive evaluation of metal pollution in urban soils of a post-industrial city—A case of Łódź, Poland

K Wieczorek, A Turek, M Szczesio, WM Wolf - Molecules, 2020 - mdpi.com
The pollution of urban soils by metals is a global problem. Prolonged exposure of habitants
who are in contact with metals retained in soil poses a health risk. This particularly applies to …