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Genome analysis through image processing with deep learning models
Genomic sequences are traditionally represented as strings of characters: A (adenine), C
(cytosine), G (guanine), and T (thymine). However, an alternative approach involves …
(cytosine), G (guanine), and T (thymine). However, an alternative approach involves …
FlexMol: A Flexible Toolkit for Benchmarking Molecular Relational Learning
Molecular relational learning (MRL) is crucial for understanding the interaction behaviors
between molecular pairs, a critical aspect of drug discovery and development. However, the …
between molecular pairs, a critical aspect of drug discovery and development. However, the …
Mixed graph contrastive network for semi-supervised node classification
Graph Neural Networks (GNNs) have achieved promising performance in semi-supervised
node classification in recent years. However, the problem of insufficient supervision …
node classification in recent years. However, the problem of insufficient supervision …
Human-in-the-loop active learning for goal-oriented molecule generation
Machine learning (ML) systems have enabled the modelling of quantitative structure–
property relationships (QSPR) and structure-activity relationships (QSAR) using existing …
property relationships (QSPR) and structure-activity relationships (QSAR) using existing …
Molx: Enhancing large language models for molecular learning with a multi-modal extension
Large Language Models (LLMs) with their strong task-handling capabilities have shown
remarkable advancements across a spectrum of fields, moving beyond natural language …
remarkable advancements across a spectrum of fields, moving beyond natural language …
Atomas: Hierarchical alignment on molecule-text for unified molecule understanding and generation
Molecule-and-text cross-modal representation learning has emerged as a promising
direction for enhancing the quality of molecular representation, thereby improving …
direction for enhancing the quality of molecular representation, thereby improving …
MIFS: An adaptive multipath information fused self-supervised framework for drug discovery
X Gong, Q Liu, R Han, Y Guo, G Wang - Neural Networks, 2025 - Elsevier
The production of expressive molecular representations with scarce labeled data is
challenging for AI-driven drug discovery. Mainstream studies often follow a pipeline that pre …
challenging for AI-driven drug discovery. Mainstream studies often follow a pipeline that pre …
Metaenzyme: Meta pan-enzyme learning for task-adaptive redesign
Enzyme design plays a crucial role in both industrial production and biology. However, this
field faces challenges due to the lack of comprehensive benchmarks and the complexity of …
field faces challenges due to the lack of comprehensive benchmarks and the complexity of …
Atomas: Hierarchical Adaptive Alignment on Molecule-Text for Unified Molecule Understanding and Generation
Molecule-and-text cross-modal representation learning has emerged as a promising
direction for enhancing the quality of molecular representation, thereby improving …
direction for enhancing the quality of molecular representation, thereby improving …
Representing molecules as random walks over interpretable grammars
Recent research in molecular discovery has primarily been devoted to small, drug-like
molecules, leaving many similarly important applications in material design without …
molecules, leaving many similarly important applications in material design without …