A survey on deep learning in medical image registration: New technologies, uncertainty, evaluation metrics, and beyond

J Chen, Y Liu, S Wei, Z Bian, S Subramanian… - Medical Image …, 2024 - Elsevier
Deep learning technologies have dramatically reshaped the field of medical image
registration over the past decade. The initial developments, such as regression-based and U …

Medical image registration: a review

FPM Oliveira, JMRS Tavares - Computer methods in biomechanics …, 2014 - Taylor & Francis
This paper presents a review of automated image registration methodologies that have been
used in the medical field. The aim of this paper is to be an introduction to the field, provide …

SynthSR: A public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry

JE Iglesias, B Billot, Y Balbastre, C Magdamo… - Science …, 2023 - science.org
Every year, millions of brain magnetic resonance imaging (MRI) scans are acquired in
hospitals across the world. These have the potential to revolutionize our understanding of …

The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, & radiomics

S Bakas, C Sako, H Akbari, M Bilello, A Sotiras… - Scientific data, 2022 - nature.com
Glioblastoma is the most common aggressive adult brain tumor. Numerous studies have
reported results from either private institutional data or publicly available datasets. However …

Quicksilver: Fast predictive image registration–a deep learning approach

X Yang, R Kwitt, M Styner, M Niethammer - NeuroImage, 2017 - Elsevier
This paper introduces Quicksilver, a fast deformable image registration method. Quicksilver
registration for image-pairs works by patch-wise prediction of a deformation model based …

Within-subject template estimation for unbiased longitudinal image analysis

M Reuter, NJ Schmansky, HD Rosas, B Fischl - Neuroimage, 2012 - Elsevier
Longitudinal image analysis has become increasingly important in clinical studies of normal
aging and neurodegenerative disorders. Furthermore, there is a growing appreciation of the …

A reproducible evaluation of ANTs similarity metric performance in brain image registration

BB Avants, NJ Tustison, G Song, PA Cook, A Klein… - Neuroimage, 2011 - Elsevier
The United States National Institutes of Health (NIH) commit significant support to open-
source data and software resources in order to foment reproducibility in the biomedical …

Unbiased average age-appropriate atlases for pediatric studies

V Fonov, AC Evans, K Botteron, CR Almli… - Neuroimage, 2011 - Elsevier
Spatial normalization, registration, and segmentation techniques for Magnetic Resonance
Imaging (MRI) often use a target or template volume to facilitate processing, take advantage …