[PDF][PDF] The CCP4 suite: integrative software for macromolecular crystallography

J Agirre, M Atanasova, H Bagdonas… - … Section D: Structural …, 2023 - journals.iucr.org
The Collaborative Computational Project No. 4 (CCP4) is a UK-led international collective
with a mission to develop, test, distribute and promote software for macromolecular …

Alkyne derivatives of SARS-CoV-2 main protease inhibitors including nirmatrelvir inhibit by reacting covalently with the Nucleophilic Cysteine

L Brewitz, L Dumjahn, Y Zhao, CD Owen… - Journal of Medicinal …, 2023 - ACS Publications
Nirmatrelvir (PF-07321332) is a nitrile-bearing small-molecule inhibitor that, in combination
with ritonavir, is used to treat infections by severe acute respiratory syndrome coronavirus-2 …

Structural insights into i-motif DNA structures in sequences from the insulin-linked polymorphic region

D Guneri, E Alexandrou, K El Omari… - Nature …, 2024 - nature.com
The insulin-linked polymorphic region is a variable number of tandem repeats region of DNA
in the promoter of the insulin gene that regulates transcription of insulin. This region is …

Structure of the Ndc80 complex and its interactions at the yeast kinetochore–microtubule interface

JA Zahm, S Jenni, SC Harrison - Open biology, 2023 - royalsocietypublishing.org
The conserved Ndc80 kinetochore complex, Ndc80c, is the principal link between mitotic
spindle microtubules and centromere-associated proteins. We used AlphaFold 2 (AF2) to …

A broadly protective antibody targeting glycoprotein Gn inhibits severe fever with thrombocytopenia syndrome virus infection

X Ren, J Sun, W Kuang, F Yu, B Wang, Y Wang… - Nature …, 2024 - nature.com
Severe fever with thrombocytopenia syndrome virus (SFTSV) is an emerging bunyavirus that
causes severe viral hemorrhagic fever and thrombocytopenia syndrome with a fatality rate of …

Rational structure-guided design of a blood stage malaria vaccine immunogen presenting a single epitope from PfRH5

TE Harrison, N Alam, B Farrell, D Quinkert… - EMBO Molecular …, 2024 - embopress.org
There is an urgent need for improved malaria vaccine immunogens. Invasion of erythrocytes
by Plasmodium falciparum is essential for its life cycle, preceding symptoms of disease and …

Structural transitions upon guide RNA binding and their importance in Cas12g-mediated RNA cleavage

M Liu, Z Li, J Chen, J Lin, Q Lu, Y Ye, H Zhang… - PLoS …, 2023 - journals.plos.org
Cas12g is an endonuclease belonging to the type V RNA-guided CRISPR–Cas family. It is
known for its ability to cleave RNA substrates using a conserved endonuclease active site …

Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample

JR Keown, AD Crawshaw, J Trincao, L Carrique… - Nature …, 2023 - nature.com
Infectious protein crystals are an essential part of the viral lifecycle for double-stranded DNA
Baculoviridae and double-stranded RNA cypoviruses. These viral protein crystals, termed …

Perdeuterated GbpA enables neutron scattering experiments of a lytic polysaccharide monooxygenase

HV Sørensen, M Montserrat-Canals, JSM Loose… - ACS …, 2023 - ACS Publications
Lytic polysaccharide monooxygenases (LPMOs) are surface-active redox enzymes that
catalyze the degradation of recalcitrant polysaccharides, making them important tools for …

Mechanism of phospho-Ubls' specificity and conformational changes that regulate Parkin activity

DR Lenka, S Chaurasiya, L Ratnakar, A Kumar - Structure, 2024 - cell.com
PINK1 and Parkin mutations lead to the early onset of Parkinson's disease. PINK1-mediated
phosphorylation of ubiquitin (Ub), ubiquitin-like protein (NEDD8), and ubiquitin-like (Ubl) …