Evolutionary origin and functional diversification of aminotransferases

K Koper, SW Han, DC Pastor, Y Yoshikuni… - Journal of Biological …, 2022 - ASBMB
Aminotransferases (ATs) are pyridoxal 5′-phosphate–dependent enzymes that catalyze
the transamination reactions between amino acid donor and keto acid acceptor substrates …

Unveiling the complex molecular dynamics of arbuscular mycorrhizae: a comprehensive exploration and future perspectives in harnessing phosphate-solubilizing …

A Wahab, F Batool, M Muhammad, W Zaman… - Environmental and …, 2024 - Elsevier
The focus on adopting practices that ensure long-term food production while minimizing
environmental impacts has gained considerable prominence in sustainable agriculture. To …

SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations

CM Hooper, IR Castleden, SK Tanz… - Nucleic acids …, 2017 - academic.oup.com
The SUBcellular location database for Arabidopsis proteins (SUBA4, http://suba. live) is a
comprehensive collection of manually curated published data sets of large-scale subcellular …

Diversification of JAZ‐MYC signaling function in immune metabolism

LYD Johnson, IT Major, Y Chen, C Yang… - New …, 2023 - Wiley Online Library
Jasmonate (JA) re‐programs metabolism to confer resistance to diverse environmental
threats. Jasmonate stimulates the degradation of JASMONATE ZIM‐DOMAIN (JAZ) proteins …

Flux sampling is a powerful tool to study metabolism under changing environmental conditions

HA Herrmann, BC Dyson, L Vass… - NPJ systems biology …, 2019 - nature.com
The development of high-throughput 'omic techniques has sparked a rising interest in
genome-scale metabolic models, with applications ranging from disease diagnostics to crop …

Growth in fluctuating light buffers plants against photorespiratory perturbations

T von Bismarck, P Wendering… - Nature …, 2023 - nature.com
Photorespiration (PR) is the pathway that detoxifies the product of the oxygenation reaction
of Rubisco. It has been hypothesized that in dynamic light environments, PR provides a …

Leaf energy balance requires mitochondrial respiration and export of chloroplast NADPH in the light

S Shameer, RG Ratcliffe, LJ Sweetlove - Plant Physiology, 2019 - academic.oup.com
Key aspects of leaf mitochondrial metabolism in the light remain unresolved. For example,
there is debate about the relative importance of exporting reducing equivalents from …

Identification of gene function based on models capturing natural variability of Arabidopsis thaliana lipid metabolism

SC Córdoba, H Tong, A Burgos, F Zhu… - Nature …, 2023 - nature.com
Lipids play fundamental roles in regulating agronomically important traits. Advances in plant
lipid metabolism have until recently largely been based on reductionist approaches …

Computational analysis of the productivity potential of CAM

S Shameer, K Baghalian, CYM Cheung, RG Ratcliffe… - Nature Plants, 2018 - nature.com
There is considerable interest in transferring crassulacean acid metabolism (CAM) to C3
crops to improve their water-use efficiency. However, because the CAM biochemical cycle is …

PolyID: Artificial Intelligence for Discovering Performance-Advantaged and Sustainable Polymers

AN Wilson, PC St John, DH Marin, CB Hoyt… - …, 2023 - ACS Publications
A necessary transformation for a sustainable economy is the transition from fossil-derived
plastics to polymers derived from biomass and waste resources. While renewable …