[PDF][PDF] Protein-DNA recognition
RT Sauer, CO Pabo - Annu Rev Biochem, 1984 - nsm.buffalo.edu
Sequence-specific DNA-binding proteins regulate gene expression and also serve structural
and catalytic roles in other cellular processes. How do these proteins bind to double-helical …
and catalytic roles in other cellular processes. How do these proteins bind to double-helical …
[BOOK][B] Principles of nucleic acid structure
W Saenger - 2013 - books.google.com
New textbooks at all levels of chemistry appear with great regularity. Some fields like basic
biochemistry, organic reaction mechanisms, and chemical ther modynamics are well …
biochemistry, organic reaction mechanisms, and chemical ther modynamics are well …
Helix Geometry, Hydration, and G⋅ A Mismatch in a B-DNA Decamer
GG Privé, U Heinemann, S Chandrasegaran, LS Kan… - Science, 1987 - science.org
The DNA double helix is not a regular, featureless barberpole molecule. Different base
sequences have their own special signature, in the way that they influence groove width …
sequences have their own special signature, in the way that they influence groove width …
Structure of a B-DNA dodecamer: II. Influence of base sequence on helix structure
RE Dickerson, HR Drew - Journal of molecular biology, 1981 - Elsevier
Detailed examination of the structure of the B-DNA dodecamer CGCGAATTCGCG, obtained
by single-crystal X-ray analysis (Drew et al., 1981), reveals that the local helix parameters …
by single-crystal X-ray analysis (Drew et al., 1981), reveals that the local helix parameters …
Structure of catabolite gene activator protein at 2.9 Å resolution suggests binding to left-handed B-DNA
DB McKay, TA Steitz - Nature, 1981 - nature.com
The 2.9 Å resolution crystal structure of Escherichia coli catabolite gene activator protein
(CAP) completed with cyclic AMP reveals two distinct structural domains separated by a …
(CAP) completed with cyclic AMP reveals two distinct structural domains separated by a …
Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG.
AV Fratini, ML Kopka, HR Drew… - Journal of Biological …, 1982 - ASBMB
A double-helical B-DNA dodecamer has been analyzed by single crystal x-ray diffraction
methods and refined independently in four variants: sequence CGCGAATTCGCG at 20 …
methods and refined independently in four variants: sequence CGCGAATTCGCG at 20 …
Conformation and dynamics of DNA and protein-DNA complexes by 31P NMR
DG Gorenstein - Chemical Reviews, 1994 - ACS Publications
31P NMR has developed as a powerful probe of the structure and dynamics of nucleicacids
and nucleic acid complexes in solution. Until recently 31P NMR studies of nucleic acids …
and nucleic acid complexes in solution. Until recently 31P NMR studies of nucleic acids …
G-quadruplexes as versatile scaffolds for catalysis
DNA is receiving attention as a useful biomaterial in a broad range of research fields beyond
its classical role as a biopolymer for storage and delivery of genetic information. Based on its …
its classical role as a biopolymer for storage and delivery of genetic information. Based on its …
Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved “chromatin folding code”
P Vogt - Human genetics, 1990 - Springer
This review is based on a thorough description of the structure and sequence organization
of tandemly organized repetitive DNA sequence families in the human genome; it is aimed …
of tandemly organized repetitive DNA sequence families in the human genome; it is aimed …
Deciphering the mechanical properties of B‐DNA duplex
H Dohnalová, F Lankaš - Wiley Interdisciplinary Reviews …, 2022 - Wiley Online Library
Abstract Structure and deformability of the DNA double helix play a key role in protein and
small ligand binding, in genome regulation via loo**, or in nanotechnology applications …
small ligand binding, in genome regulation via loo**, or in nanotechnology applications …