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A review of UMAP in population genetics
A Diaz-Papkovich, L Anderson-Trocmé… - Journal of Human …, 2021 - nature.com
Uniform manifold approximation and projection (UMAP) has been rapidly adopted by the
population genetics community to study population structure. It has become common in …
population genetics community to study population structure. It has become common in …
Dual effector population modification gene-drive strains of the African malaria mosquitoes, Anopheles gambiae and Anopheles coluzzii
Proposed genetic approaches for reducing human malaria include population modification,
which introduces genes into vector mosquitoes to reduce or prevent parasite transmission …
which introduces genes into vector mosquitoes to reduce or prevent parasite transmission …
[HTML][HTML] Evolutionary consequences of long-distance dispersal in mosquitoes
TL Schmidt - Current Opinion in Insect Science, 2024 - Elsevier
Highlights•Long-distance dispersal underlies the global threat of mosquito disease•Long-
distance dispersal and active flight should be analysed as distinct processes•Insecticide …
distance dispersal and active flight should be analysed as distinct processes•Insecticide …
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations
Simulation is a key tool in population genetics for both methods development and empirical
research, but producing simulations that recapitulate the main features of genomic datasets …
research, but producing simulations that recapitulate the main features of genomic datasets …
Visualizing population structure with variational autoencoders
Dimensionality reduction is a common tool for visualization and inference of population
structure from genotypes, but popular methods either return too many dimensions for easy …
structure from genotypes, but popular methods either return too many dimensions for easy …
The genetic architecture of target‐site resistance to pyrethroid insecticides in the African malaria vectors Anopheles gambiae and Anopheles coluzzii
Resistance to pyrethroid insecticides is a major concern for malaria vector control.
Pyrethroids target the voltage‐gated sodium channel (VGSC), an essential component of the …
Pyrethroids target the voltage‐gated sodium channel (VGSC), an essential component of the …
Population genomic evidence of a putative 'far-west' African cryptic taxon in the Anopheles gambiae complex
B Caputo, CM De Marco, V Pichler, G Bottà… - Communications …, 2024 - nature.com
The two main Afrotropical malaria vectors-Anopheles coluzzii and An. gambiae–are
genetically distinct and reproductively isolated across West Africa. However, populations at …
genetically distinct and reproductively isolated across West Africa. However, populations at …
Resistance to a CRISPR-based gene drive at an evolutionarily conserved site is revealed by mimicking genotype fixation
CRISPR-based homing gene drives can be designed to disrupt essential genes whilst
biasing their own inheritance, leading to suppression of mosquito populations in the …
biasing their own inheritance, leading to suppression of mosquito populations in the …
Double drives and private alleles for localised population genetic control
Synthetic gene drive constructs could, in principle, provide the basis for highly efficient
interventions to control disease vectors and other pest species. This efficiency derives in part …
interventions to control disease vectors and other pest species. This efficiency derives in part …
Cryptic population structure and insecticide resistance in Anopheles gambiae from the southern Democratic Republic of Congo
Abstract The Democratic Republic of Congo (DRC) suffers from one of the highest malaria
burdens worldwide, but information on its Anopheles vector populations is relatively limited …
burdens worldwide, but information on its Anopheles vector populations is relatively limited …