Implications of streamlining theory for microbial ecology

SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …

Prochlorococcus: the structure and function of collective diversity

SJ Biller, PM Berube, D Lindell… - Nature Reviews …, 2015 - nature.com
The marine cyanobacterium Prochlorococcus is the smallest and most abundant
photosynthetic organism on Earth. In this Review, we summarize our understanding of the …

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms

H Teeling, BM Fuchs, CM Bennke, K Krüger, M Chafee… - elife, 2016 - elifesciences.org
A process of global importance in carbon cycling is the remineralization of algae biomass by
heterotrophic bacteria, most notably during massive marine algae blooms. Such blooms can …

Spatial and seasonal variation in diversity and structure of microbial biofilms on marine plastics in Northern European waters

S Oberbeckmann, MGJ Loeder… - FEMS microbiology …, 2014 - academic.oup.com
Plastic pollution is now recognised as a major threat to marine environments and marine
biota. Recent research highlights that diverse microbial species are found to colonise plastic …

SAR11 bacteria: the most abundant plankton in the oceans

SJ Giovannoni - Annual review of marine science, 2017 - annualreviews.org
SAR11 is a group of small, carbon-oxidizing bacteria that reach a global estimated
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean

BK Swan, M Martinez-Garcia, CM Preston, A Sczyrba… - Science, 2011 - science.org
Recent studies suggest that unidentified prokaryotes fix inorganic carbon at globally
significant rates in the immense dark ocean. Using single-cell sorting and whole-genome …

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

CL Dupont, DB Rusch, S Yooseph… - The ISME …, 2012 - academic.oup.com
Bacteria in the 16S rRNA clade SAR86 are among the most abundant uncultivated
constituents of microbial assemblages in the surface ocean for which little genomic …

Microbial metagenomics: beyond the genome

JA Gilbert, CL Dupont - Annual review of marine science, 2011 - annualreviews.org
Metagenomics literally means “beyond the genome.” Marine microbial metagenomic
databases presently comprise∼ 400 billion base pairs of DNA, only∼ 3% of that found in 1 …

Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine …

W Qin, KR Heal, R Ramdasi… - … of systematic and …, 2017 - microbiologyresearch.org
Four mesophilic, neutrophilic, and aerobic marine ammonia-oxidizing archaea, designated
strains SCM1T, HCA1T, HCE1T and PS0T, were isolated from a tropical marine fish tank …

Seasonality in ocean microbial communities

SJ Giovannoni, KL Vergin - Science, 2012 - science.org
Ocean warming occurs every year in seasonal cycles that can help us to understand long-
term responses of plankton to climate change. Rhythmic seasonal patterns of microbial …