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Function and functional redundancy in microbial systems
Microbial communities often exhibit incredible taxonomic diversity, raising questions
regarding the mechanisms enabling species coexistence and the role of this diversity in …
regarding the mechanisms enabling species coexistence and the role of this diversity in …
Inferring microbiota functions from taxonomic genes: a review
Deciphering microbiota functions is crucial to predict ecosystem sustainability in response to
global change. High-throughput sequencing at the individual or community level has …
global change. High-throughput sequencing at the individual or community level has …
Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants
Abstract In late 2022, SARS-CoV-2 Omicron subvariants have become highly diversified,
and XBB is spreading rapidly around the world. Our phylogenetic analyses suggested that …
and XBB is spreading rapidly around the world. Our phylogenetic analyses suggested that …
Virological characteristics of the SARS-CoV-2 Omicron BA. 2 subvariants, including BA. 4 and BA. 5
After the global spread of the SARS-CoV-2 Omicron BA. 2, some BA. 2 subvariants,
including BA. 2.9. 1, BA. 2.11, BA. 2.12. 1, BA. 4, and BA. 5, emerged in multiple countries …
including BA. 2.9. 1, BA. 2.11, BA. 2.12. 1, BA. 4, and BA. 5, emerged in multiple countries …
The evolutionary drivers and correlates of viral host jumps
Most emerging and re-emerging infectious diseases stem from viruses that naturally
circulate in non-human vertebrates. When these viruses cross over into humans, they can …
circulate in non-human vertebrates. When these viruses cross over into humans, they can …
PICRUSt2 for prediction of metagenome functions
To the Editor—One limitation of microbial community marker-gene sequencing is that it does
not provide information about the functional composition of sampled communities …
not provide information about the functional composition of sampled communities …
The human tumor microbiome is composed of tumor type–specific intracellular bacteria
Bacteria were first detected in human tumors more than 100 years ago, but the
characterization of the tumor microbiome has remained challenging because of its low …
characterization of the tumor microbiome has remained challenging because of its low …
[HTML][HTML] Single-cell genomic variation induced by mutational processes in cancer
How cell-to-cell copy number alterations that underpin genomic instability in human cancers
drive genomic and phenotypic variation, and consequently the evolution of cancer, remains …
drive genomic and phenotypic variation, and consequently the evolution of cancer, remains …
Ecological memory of recurrent drought modifies soil processes via changes in soil microbial community
Climate change is altering the frequency and severity of drought events. Recent evidence
indicates that drought may produce legacy effects on soil microbial communities. However, it …
indicates that drought may produce legacy effects on soil microbial communities. However, it …
Composition and metabolism of microbial communities in soil pores
Delineation of microbial habitats within the soil matrix and characterization of their
environments and metabolic processes are crucial to understand soil functioning, yet their …
environments and metabolic processes are crucial to understand soil functioning, yet their …