Light sheet fluorescence microscopy

EHK Stelzer, F Strobl, BJ Chang, F Preusser… - Nature Reviews …, 2021 - nature.com
Light sheet fluorescence microscopy (LSFM) uses a thin sheet of light to excite only
fluorophores within the focal volume. Light sheet microscopes (LSMs) have a true optical …

Extended reality for biomedicine

J Yuan, SS Hassan, J Wu, CR Koger… - Nature Reviews …, 2023 - nature.com
Extended reality (XR) refers to an umbrella of methods that allows users to be immersed in a
3D or a 4D (spatial+ temporal) virtual environment to various extents, including virtual reality …

SNT: a unifying toolbox for quantification of neuronal anatomy

C Arshadi, U Günther, M Eddison, KIS Harrington… - Nature …, 2021 - nature.com
SNT is an end-to-end framework for neuronal morphometry and whole-brain connectomics
that supports tracing, proof-editing, visualization, quantification and modeling of …

Immersive analytics with abstract 3D visualizations: A survey

M Kraus, J Fuchs, B Sommer, K Klein… - Computer Graphics …, 2022 - Wiley Online Library
After a long period of scepticism, more and more publications describe basic research but
also practical approaches to how abstract data can be presented in immersive environments …

[HTML][HTML] u-track3D: Measuring, navigating, and validating dense particle trajectories in three dimensions

P Roudot, WR Legant, Q Zou, KM Dean, T Isogai… - Cell Reports …, 2023 - cell.com
We describe u-track3D, a software package that extends the versatile u-track framework
established in 2D to address the specific challenges of 3D particle tracking. First, we present …

[HTML][HTML] Mesoscale microscopy and image analysis tools for understanding the brain

AL Tyson, TW Margrie - Progress in Biophysics and Molecular Biology, 2022 - Elsevier
Over the last ten years, developments in whole-brain microscopy now allow for high-
resolution imaging of intact brains of small animals such as mice. These complex images …

Virtual inspection of additively manufactured parts

P Klacansky, H Miao, A Gyulassy… - 2022 IEEE 15th …, 2022 - ieeexplore.ieee.org
Advanced manufacturing techniques, such as additive manufacturing, enable the design of
increasingly complex components for a wide range of industrial applications. However, this …

[HTML][HTML] Real-time modeling of volume and form dependent nanoparticle fractionation in tubular centrifuges

M Winkler, F Rhein, H Nirschl, M Gleiss - Nanomaterials, 2022 - mdpi.com
A dynamic process model for the simulation of nanoparticle fractionation in tubular
centrifuges is presented. Established state-of-the-art methods are further developed to …

Map** the neuronal cytoskeleton using expansion microscopy

D Jurriens, V van Batenburg, EA Katrukha… - Methods in cell …, 2021 - Elsevier
Expansion microscopy (ExM) is a recently introduced technique that enables high-resolution
imaging with conventional microscopes by using physical expansion of samples. While this …

Super-resolution expansion microscopy in plant roots

M Gallei, S Truckenbrodt, C Kreuzinger, S Inumella… - BioRxiv, 2024 - biorxiv.org
Super-resolution methods enable spatial resolution far better than the optical diffraction limit
of about half the wavelength of light (∼ 200-300 nm) but have yet to attain widespread use …