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Chloroplast genomes: diversity, evolution, and applications in genetic engineering
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …
sequenced chloroplast genomes from a variety of land plants has enhanced our …
Phylogenomics and the flowering plant tree of life
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …
technologies continue to provide an impetus for plant phylogenetic study. In the past …
Genoty**-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding
J He, X Zhao, A Laroche, ZX Lu, HK Liu… - Frontiers in plant …, 2014 - frontiersin.org
Marker-assisted selection (MAS) refers to the use of molecular markers to assist phenotypic
selections in crop improvement. Several types of molecular markers, such as single …
selections in crop improvement. Several types of molecular markers, such as single …
Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis
The purpose of this review is to present the most common and emerging DNA‐based
methods used to generate data for biodiversity and biomonitoring studies. As environmental …
methods used to generate data for biodiversity and biomonitoring studies. As environmental …
A robust, simple genoty**-by-sequencing (GBS) approach for high diversity species
Advances in next generation technologies have driven the costs of DNA sequencing down
to the point that genoty**-by-sequencing (GBS) is now feasible for high diversity, large …
to the point that genoty**-by-sequencing (GBS) is now feasible for high diversity, large …
Genoty**‐by‐sequencing for plant breeding and genetics
Rapid advances in “next‐generation” DNA sequencing technology have brought the US
$1000 human (Homo sapiens) genome within reach while providing the raw sequencing …
$1000 human (Homo sapiens) genome within reach while providing the raw sequencing …
Plann: A command‐line application for annotating plastome sequences
Premise of the study: Plann automates the process of annotating a plastome sequence in
GenBank format for either downstream processing or for GenBank submission by annotating …
GenBank format for either downstream processing or for GenBank submission by annotating …
From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes
Background Next-generation sequencing has provided a wealth of plastid genome
sequence data from an increasingly diverse set of green plants (Viridiplantae). Although …
sequence data from an increasingly diverse set of green plants (Viridiplantae). Although …
Navigating the tip of the genomic iceberg: Next‐generation sequencing for plant systematics
• Premise of the study: Just as Sanger sequencing did more than 20 years ago, next‐
generation sequencing (NGS) is poised to revolutionize plant systematics. By combining …
generation sequencing (NGS) is poised to revolutionize plant systematics. By combining …
Target-enrichment strategies for next-generation sequencing
L Mamanova, AJ Coffey, CE Scott, I Kozarewa… - Nature …, 2010 - nature.com
We have not yet reached a point at which routine sequencing of large numbers of whole
eukaryotic genomes is feasible, and so it is often necessary to select genomic regions of …
eukaryotic genomes is feasible, and so it is often necessary to select genomic regions of …