SimVascular: an open source pipeline for cardiovascular simulation

A Updegrove, NM Wilson, J Merkow, H Lan… - Annals of biomedical …, 2017 - Springer
Patient-specific cardiovascular simulation has become a paradigm in cardiovascular
research and is emerging as a powerful tool in basic, translational and clinical research. In …

A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes

D Lesage, ED Angelini, I Bloch, G Funka-Lea - Medical image analysis, 2009 - Elsevier
Vascular diseases are among the most important public health problems in developed
countries. Given the size and complexity of modern angiographic acquisitions, segmentation …

An image-based modeling framework for patient-specific computational hemodynamics

L Antiga, M Piccinelli, L Botti, B Ene-Iordache… - Medical & biological …, 2008 - Springer
We present a modeling framework designed for patient-specific computational
hemodynamics to be performed in the context of large-scale studies. The framework takes …

FiberApp: an open-source software for tracking and analyzing polymers, filaments, biomacromolecules, and fibrous objects

I Usov, R Mezzenga - Macromolecules, 2015 - ACS Publications
Biological semiflexible polymers and filaments such as collagen, fibronectin, actin,
microtubules, coiled-coil proteins, DNA, siRNA, amyloid fibrils, etc., are ubiquitous in nature …

System, method and devices for navigated flexible endoscopy

ND Glossop - US Patent 9,661,991, 2017 - Google Patents
The invention provides a method and system for performing an image-guided endoscopic
medical procedure. The invention may include registering image-space coordinates of a …

An approach to localize the retinal blood vessels using bit planes and centerline detection

MM Fraz, SA Barman, P Remagnino, A Hoppe… - Computer methods and …, 2012 - Elsevier
The change in morphology, diameter, branching pattern or tortuosity of retinal blood vessels
is an important indicator of various clinical disorders of the eye and the body. This paper …

[LIBRO][B] Medial representations: mathematics, algorithms and applications

K Siddiqi, S Pizer - 2008 - books.google.com
The last half century has seen the development of many biological or physical t-ories that
have explicitly or implicitly involved medial descriptions of objects and other spatial entities …

Flux maximizing geometric flows

A Vasilevskiy, K Siddiqi - IEEE transactions on pattern analysis …, 2002 - ieeexplore.ieee.org
Several geometric active contour models have been proposed for segmentation in computer
vision and image analysis. The essential idea is to evolve a curve (in 2D) or a surface (in …

System, method and apparatus for navigated therapy and diagnosis

ND Glossop - US Patent 8,632,461, 2014 - Google Patents
Access to natural and artificial passages in the body for treatment or investigation for
possible treatment traditionally make use of elongated instruments that are inserted into the …

[HTML][HTML] Human treelike tubular structure segmentation: A comprehensive review and future perspectives

H Li, Z Tang, Y Nan, G Yang - Computers in Biology and Medicine, 2022 - Elsevier
Various structures in human physiology follow a treelike morphology, which often expresses
complexity at very fine scales. Examples of such structures are intrathoracic airways, retinal …