Diversity, ecology, and prevalence of antimicrobials in nature

MM Mullis, IM Rambo, BJ Baker, BK Reese - Frontiers in microbiology, 2019 - frontiersin.org
Microorganisms possess a variety of survival mechanisms, including the production of
antimicrobials that function to kill and/or inhibit the growth of competing microorganisms …

Cyanobacterial blooms: A player in the freshwater environmental resistome with public health relevance?

A Volk, J Lee - Environmental research, 2023 - Elsevier
Cyanobacterial harmful algal blooms (cyanoHABs) are an ecological concern because of
large ecosystem-disrupting blooms and a global public health concern because of the …

[HTML][HTML] Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

TO Delmont, AM Eren - PeerJ, 2018 - peerj.com
Pangenomes offer detailed characterizations of core and accessory genes found in a set of
closely related microbial genomes, generally by clustering genes based on sequence …

Bioprospecting desert plant Bacillus endophytic strains for their potential to enhance plant stress tolerance

A Bokhari, M Essack, FF Lafi, C Andres-Barrao… - Scientific reports, 2019 - nature.com
Plant growth-promoting bacteria (PGPB) are known to increase plant tolerance to several
abiotic stresses, specifically those from dry and salty environments. In this study, we …

A comparative metagenomic study reveals microbial diversity and their role in the biogeochemical cycling of Pangong lake

R Rathour, J Gupta, A Mishra, AC Rajeev… - Science of the Total …, 2020 - Elsevier
The environment of a high altitude brackish water lake presents an unprecedented reservoir
for the microbial community with adaptability towards surviving stressful conditions …

Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater

Y Nishikawa, M Kogawa, M Hosokawa… - ISME …, 2022 - academic.oup.com
Single-cell genomics is applied to environmental samples as a method to solve the
problems of current metagenomics. However, in the fluorescence-activated cell sorting …

Metagenomic analysis reveals genetic insights on biogeochemical cycling, xenobiotic degradation, and stress resistance in mudflat microbiome

M Mohapatra, R Yadav, V Rajput, MS Dharne… - Journal of …, 2021 - Elsevier
Mudflats are highly productive coastal ecosystems that are dominated by halophytic
vegetation. In this study, the mudflat sediment microbiome was investigated from Nalabana …

Knowledge gaps in the assessment of antimicrobial resistance in surface waters

M Niegowska, I Sanseverino, A Navarro… - FEMS Microbiology …, 2021 - academic.oup.com
The spread of antibiotic resistance in the water environment has been widely described.
However, still many knowledge gaps exist regarding the selection pressure from antibiotics …

Comparison of bacterial diversity from two mangrove ecosystems from India through metagenomic sequencing

VK Nathan, J Vijayan, P Ammini - Regional Studies in Marine Science, 2020 - Elsevier
In the present study, we explored the microbial diversity of two mangrove regions,
Mangalavanam (MAN) and Puthuvype (PVY), in Cochin, India. While PVY is a coastal …

Potential risks of antibiotic resistant bacteria and genes in bioremediation of petroleum hydrocarbon contaminated soils

CJ Cunningham, MS Kuyukina, IB Ivshina… - … Science: Processes & …, 2020 - pubs.rsc.org
Bioremediation represents a sustainable approach to remediating petroleum hydrocarbon
contaminated soils. One aspect of sustainability includes the sourcing of nutrients used to …