[HTML][HTML] Oxidative stress in type 2 diabetes: The case for future pediatric redoxomics studies

SN Alu, EA Los, GA Ford, WL Stone - Antioxidants, 2022 - mdpi.com
Considerable evidence supports the role of oxidative stress in adult type 2 diabetes (T2D).
Due to increasing rates of pediatric obesity, lack of physical activity, and consumption of …

ConSIG: consistent discovery of molecular signature from OMIC data

F Li, J Yin, M Lu, Q Yang, Z Zeng, B Zhang… - Briefings in …, 2022 - academic.oup.com
The discovery of proper molecular signature from OMIC data is indispensable for
determining biological state, physiological condition, disease etiology, and therapeutic …

Proteomic analysis of vitreous humour of eyes with diabetic macular oedema: a systematic review

MS Hansen, M Rasmussen, J Grauslund… - Acta …, 2022 - Wiley Online Library
The pathophysiology of diabetic macular oedema (DME) remains poorly understood.
Proteomic analysis of the vitreous using mass spectrometry (MS) can potentially identify …

[HTML][HTML] Multiple imputation approaches applied to the missing value problem in bottom-up proteomics

ML Gardner, MA Freitas - International journal of molecular sciences, 2021 - mdpi.com
Analysis of differential abundance in proteomics data sets requires careful application of
missing value imputation. Missing abundance values widely vary when performing …

Rapid multivariate analysis approach to explore differential spatial protein profiles in tissue

K Sharman, NH Patterson, A Weiss… - Journal of proteome …, 2022 - ACS Publications
Spatially targeted proteomics analyzes the proteome of specific cell types and functional
regions within tissue. While spatial context is often essential to understanding biological …

iRNA-m5C_NB: a novel predictor to identify RNA 5-Methylcytosine sites based on the Naive Bayes classifier

L Dou, X Li, H Ding, L Xu, H **ang - IEEE Access, 2020 - ieeexplore.ieee.org
As one of the widespread RNA post-transcriptional modifications (PTCMs), 5-Methylcytosine
(m5C) plays vital roles in better understanding of basic biological mechanisms and major …

Proteomic Analysis of the Effects of Shenzhu Tiaopi Granules on Model Rats with Type 2 Diabetes Mellitus

JD Zhao, ZH Fang - Diabetes, Metabolic Syndrome and Obesity, 2025 - Taylor & Francis
Background Shenzhu Tiaopi granule (STG) has antidiabetic functions. Data-independent
acquisition proteomic technology is an integral part of systems biology. Herein, proteomics …

Longitudinal proteomics analysis in the immediate microenvironment of islet allografts during progression of rejection

O Alcazar, LF Hernandez, ES Nakayasu… - Journal of …, 2020 - Elsevier
The applicability and benefits of pancreatic islet transplantation are limited due to various
issues including the need to avoid immune-mediated rejection. Here, we used our …

Identifying potential mitochondrial proteome signatures associated with the pathogenesis of pulmonary arterial hypertension in the rat model

J Wang, MN Uddin, Q Li, A Aierken… - Oxidative Medicine …, 2022 - Wiley Online Library
Pulmonary arterial hypertension (PAH) is a severe and progressive disease that affects the
heart and lungs and a global health concern that impacts individuals and society. Studies …

Functional annotation and enrichment analysis of differentially expressed serum proteins in patients with type 2 diabetes after dapagliflozin

YX Zhao, S Borjigin, ZL Yan - World Journal of Diabetes, 2022 - pmc.ncbi.nlm.nih.gov
BACKGROUND Only 50% of patients with type 2 diabetes mellitus (T2DM) can control their
blood glucose levels. Dapagliflozin is a selective inhibitor of sodium-glucose co-transporter …