Canine circovirus (CanineCV) is a deadly pathogen affecting both domestic and wild
carnivores including dogs. No vaccine against CanineCV is available commercially or under …

We have created a benchmark set of quantum chemical structure–energy data denoted as
UpU46, which consists of 46 uracil dinucleotides (UpU), representing all known 46 RNA …

Prediction of RNA structure from sequence remains an unsolved problem, and progress has
been slowed by a paucity of experimental data. Here, we present Ribonanza, a dataset of …

Posttranscriptional modifications greatly enhance the chemical information of RNA
molecules, contributing to explain the diversity of their structures and functions. A significant …

The specific folding pattern and function of RNA molecules lies in various weak interactions,
in addition to the strong base-base pairing and stacking. One of these relatively weak …

We identified over 1000 instances of water-nucleobase stacking contacts in a variety of RNA
molecules from a non-redundant set of crystal structures with resolution≤ 3.0 Å. Such …

We present a systematic structural and energetic characterization of phosphate (OP)–
nucleobase anion… π stacking interactions in RNAs. We observed OP–nucleobase stacking …

The neomycin sensing riboswitch is the smallest biologically functional RNA riboswitch,
forming a hairpin capped with a U-turn loop—a well-known RNA motif containing a …

Noncoding RNA molecules are composed of a large variety of noncanonical base pairs that
shape up their functionally competent folded structures. Each base pair is composed of at …

This study presents a comprehensive theoretical exploration of the fluorescent non-natural
emissive nucleobases-mthA, mthG, mthC, and mthU derived from the methylthieno [3, 4-d] …