Diffusion models: A comprehensive survey of methods and applications
Diffusion models have emerged as a powerful new family of deep generative models with
record-breaking performance in many applications, including image synthesis, video …
record-breaking performance in many applications, including image synthesis, video …
Scientific large language models: A survey on biological & chemical domains
Large Language Models (LLMs) have emerged as a transformative power in enhancing
natural language comprehension, representing a significant stride toward artificial general …
natural language comprehension, representing a significant stride toward artificial general …
Accurate structure prediction of biomolecular interactions with AlphaFold 3
The introduction of AlphaFold 21 has spurred a revolution in modelling the structure of
proteins and their interactions, enabling a huge range of applications in protein modelling …
proteins and their interactions, enabling a huge range of applications in protein modelling …
Generalized biomolecular modeling and design with RoseTTAFold All-Atom
Deep-learning methods have revolutionized protein structure prediction and design but are
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …
An artificial intelligence accelerated virtual screening platform for drug discovery
Abstract Structure-based virtual screening is a key tool in early drug discovery, with growing
interest in the screening of multi-billion chemical compound libraries. However, the success …
interest in the screening of multi-billion chemical compound libraries. However, the success …
Enhancing activity prediction models in drug discovery with the ability to understand human language
Activity and property prediction models are the central workhorses in drug discovery and
materials sciences, but currently, they have to be trained or fine-tuned for new tasks. Without …
materials sciences, but currently, they have to be trained or fine-tuned for new tasks. Without …
Application of computational biology and artificial intelligence in drug design
Traditional drug design requires a great amount of research time and developmental
expense. Booming computational approaches, including computational biology, computer …
expense. Booming computational approaches, including computational biology, computer …
A review of large language models and autonomous agents in chemistry
Large language models (LLMs) have emerged as powerful tools in chemistry, significantly
impacting molecule design, property prediction, and synthesis optimization. This review …
impacting molecule design, property prediction, and synthesis optimization. This review …
Git-mol: A multi-modal large language model for molecular science with graph, image, and text
Large language models have made significant strides in natural language processing,
enabling innovative applications in molecular science by processing textual representations …
enabling innovative applications in molecular science by processing textual representations …
Drugclip: Contrasive protein-molecule representation learning for virtual screening
Virtual screening, which identifies potential drugs from vast compound databases to bind
with a particular protein pocket, is a critical step in AI-assisted drug discovery. Traditional …
with a particular protein pocket, is a critical step in AI-assisted drug discovery. Traditional …