Detecting sequence homology at the gene cluster level with MultiGeneBlast
The genes encoding many biomolecular systems and pathways are genomically organized
in operons or gene clusters. With MultiGeneBlast, we provide a user-friendly and effective …
in operons or gene clusters. With MultiGeneBlast, we provide a user-friendly and effective …
Kerfuffle: a web tool for multi-species gene colocalization analysis
R Aboukhalil, B Fendler, GS Atwal - BMC bioinformatics, 2013 - Springer
Background The evolutionary pressures that underlie the large-scale functional organization
of the genome are not well understood in eukaryotes. Recent evidence suggests that …
of the genome are not well understood in eukaryotes. Recent evidence suggests that …
Novel amidases of two Aminobacter sp. strains: Biotransformation experiments and elucidation of gene sequences
U Engel, C Syldatk, J Rudat - AMB express, 2012 - Springer
The amidase activities of two Aminobacter sp. strains (DSM24754 and DSM24755) towards
the aryl-substituted substrates phenylhydantoin, indolylmethyl hydantoin, D, L-6-phenyl-5, 6 …
the aryl-substituted substrates phenylhydantoin, indolylmethyl hydantoin, D, L-6-phenyl-5, 6 …
BLAST-XYPlot viewer: a tool for performing BLAST in whole-genome sequenced bacteria/archaea and visualize whole results simultaneously
Y Pedraza-Pérez, RA Cuevas-Vede… - G3: Genes …, 2018 - academic.oup.com
One of the most commonly used tools to compare protein or DNA sequences against
databases is BLAST. We introduce a web tool that allows the performance of BLAST …
databases is BLAST. We introduce a web tool that allows the performance of BLAST …
[PDF][PDF] Elucidating Cancer Evolution using Single-Cell Sequencing and Comparative Genomics
R Aboukhalil - 2016 - repository.cshl.edu
Cancer is a family of diseases characterized by an accumulation of mutations. These genetic
and epigenetic alterations impart the cell with properties of uncontrolled growth and …
and epigenetic alterations impart the cell with properties of uncontrolled growth and …
Medicines from microbes: exploiting the power of computational genomics for natural products discovery and engineering
MH Medema - 2013 - research.rug.nl
Bacteriën, schimmels en planten produceren allerlei chemische stofjes, waarvan velen
medicinaal worden toegepast als bijvoorbeeld antibiotica, chemotherapeutica …
medicinaal worden toegepast als bijvoorbeeld antibiotica, chemotherapeutica …
[HTML][HTML] Kerfuffle: a web tool for multi-species gene colocalization analysis
GS Atwal, B Fendler, R Aboukhalil - 2013 - oa.las.ac.cn
Background The evolutionary pressures that underlie the large-scale functional organization
of the genome are not well understood in eukaryotes. Recent evidence suggests that …
of the genome are not well understood in eukaryotes. Recent evidence suggests that …
[CITACE][C] GSV–A Light-weighted Genome Synteny Visualization Tool
KV Revanna, CC Chiu, E Bierschank, Q Dong - 2011