High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

J Woo, SM Williams, LM Markillie, S Feng… - Nature …, 2021 - nature.com
Global quantification of protein abundances in single cells could provide direct information
on cellular phenotypes and complement transcriptomics measurements. However, single …

Rapid, one-step sample processing for label-free single-cell proteomics

SM Johnston, KGI Webber, X **e… - Journal of the …, 2023 - ACS Publications
Sample preparation for single-cell proteomics is generally performed in a one-pot workflow
with multiple dispensing and incubation steps. These hours-long processes can be labor …

Automation of single‐cell proteomic sample preparation

M Alexovič, J Sabo, R Longuespée - Proteomics, 2021 - Wiley Online Library
Molecular heterogeneity exists at different spatial scales in biological samples and is an
important parameter in the development of pathologies and resistances to therapies. When …

A roadmap for translational cancer glycoimmunology at single cell resolution

A Peixoto, A Miranda, LL Santos, JA Ferreira - Journal of Experimental & …, 2022 - Springer
Cancer cells can evade immune responses by exploiting inhibitory immune checkpoints.
Immune checkpoint inhibitor (ICI) therapies based on anti-CTLA-4 and anti-PD-1/PD-L1 …

Spectral library-based single-cell proteomics resolves cellular heterogeneity

L Senavirathna, C Ma, R Chen, S Pan - Cells, 2022 - mdpi.com
Dissecting the proteome of cell types and states at single-cell resolution, while being highly
challenging, has significant implications in basic science and biomedicine. Mass …

MassLite: An integrated python platform for single cell mass spectrometry metabolomics data pretreatment with graphical user interface and advanced peak alignment …

Z Zou, Z Peng, D Bhusal, SW Munige, Z Yang - Analytica Chimica Acta, 2024 - Elsevier
Mass spectrometry (MS) has been one of the most widely used tools for bioanalytical
analysis due to its high sensitivity, capability of quantitative analysis, and compatibility with …

SLB-msSIM: a spectral library-based multiplex segmented SIM platform for single-cell proteomic analysis

L Senavirathna, C Ma, VA Duong, HY Tsai, R Chen… - bioRxiv, 2024 - biorxiv.org
Mass spectrometry (MS)-based single-cell proteomics, while highly challenging, offers
unique potential for a wide range of applications to interrogate cellular heterogeneity …

Microfluidic Sample Preparation for Multiplexed Single-Cell Proteomics Using a Nested Nanowell Chip

J Park, TK Cheung, Y Zhu - Proteomics for Drug Discovery, 2024 - Springer
Mass spectrometry-based single-cell proteomics has undergone rapid progress and has
become an active research area. However, because of the ultralow amount of proteins in …