Selection transforms the landscape of genetic variation interacting with Hsp90

KA Geiler-Samerotte, YO Zhu, BE Goulet, DW Hall… - PLoS …, 2016 - journals.plos.org
The protein-folding chaperone Hsp90 has been proposed to buffer the phenotypic effects of
mutations. The potential for Hsp90 and other putative buffers to increase robustness to …

Extent and context dependence of pleiotropy revealed by high-throughput single-cell phenoty**

KA Geiler-Samerotte, S Li, C Lazaris, A Taylor… - PLoS …, 2020 - journals.plos.org
Pleiotropy—when a single mutation affects multiple traits—is a controversial topic with far-
reaching implications. Pleiotropy plays a central role in debates about how complex traits …

Application of unimodal probability distribution models for morphological phenoty** of budding yeast

Y Ohya, F Ghanegolmohammadi… - FEMS Yeast …, 2024 - academic.oup.com
Morphological phenoty** of the budding yeast Saccharomyces cerevisiae has helped to
greatly clarify the functions of genes and increase our understanding of cellular functional …

Single-cell phenomics in budding yeast

Y Ohya, Y Kimori, H Okada… - Molecular biology of the …, 2015 - Am Soc Cell Biol
The demand for phenomics, a high-dimensional and high-throughput phenoty** method,
has been increasing in many fields of biology. The budding yeast Saccharomyces …

Cucurbitacin B exerts antiaging effects in yeast by regulating autophagy and oxidative stress

Y Lin, Y Kotakeyama, J Li, Y Pan… - Oxidative Medicine …, 2019 - Wiley Online Library
The budding yeast Saccharomyces cerevisiae has been used as a model organism for the
basic mechanism of aging, which provides useful assay systems for measuring both …

Targeted mutations produce divergent characteristics in pedigreed sake yeast strains

N Klinkaewboonwong, S Ohnuki, T Chadani, I Nishida… - Microorganisms, 2023 - mdpi.com
Modification of the genetic background and, in some cases, the introduction of targeted
mutations can play a critical role in producing trait characteristics during the breeding of …

Are droplets really suitable for single-cell analysis? A case study on yeast in droplets

Y Nakagawa, S Ohnuki, N Kondo, K Itto-Nakama… - Lab on a Chip, 2021 - pubs.rsc.org
Single-cell analysis has become one of the main cornerstones of biotechnology, inspiring
the advent of various microfluidic compartments for cell cultivation such as microwells …

Testing the neutral hypothesis of phenotypic evolution

WC Ho, Y Ohya, J Zhang - Proceedings of the National …, 2017 - National Acad Sciences
Although evolution by natural selection is widely regarded as the most important principle of
biology, it is unknown whether phenotypic variations within and between species are mostly …

High-dimensional single-cell phenoty** reveals extensive haploinsufficiency

S Ohnuki, Y Ohya - PLoS biology, 2018 - journals.plos.org
Haploinsufficiency, a dominant phenotype caused by a heterozygous loss-of-function
mutation, has been rarely observed. However, high-dimensional single-cell phenoty** of …

High-throughput platform for yeast morphological profiling predicts the targets of bioactive compounds

S Ohnuki, I Ogawa, K Itto-Nakama, F Lu… - npj systems biology …, 2022 - nature.com
Morphological profiling is an omics-based approach for predicting intracellular targets of
chemical compounds in which the dose-dependent morphological changes induced by the …