[HTML][HTML] Myalgic encephalomyelitis/chronic fatigue syndrome: a comprehensive review

M Cortes Rivera, C Mastronardi, CT Silva-Aldana… - Diagnostics, 2019 - mdpi.com
Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a debilitating chronic
disease of unknown aetiology that is recognized by the World Health Organization (WHO) …

Network medicine: a network-based approach to human disease

AL Barabási, N Gulbahce, J Loscalzo - Nature reviews genetics, 2011 - nature.com
Given the functional interdependencies between the molecular components in a human cell,
a disease is rarely a consequence of an abnormality in a single gene, but reflects the …

Gene co-expression analysis for functional classification and gene–disease predictions

S Van Dam, U Vosa, A van der Graaf… - Briefings in …, 2018 - academic.oup.com
Gene co-expression networks can be used to associate genes of unknown function with
biological processes, to prioritize candidate disease genes or to discern transcriptional …

WGCNA: an R package for weighted correlation network analysis

P Langfelder, S Horvath - BMC bioinformatics, 2008 - Springer
Background Correlation networks are increasingly being used in bioinformatics applications.
For example, weighted gene co-expression network analysis is a systems biology method …

[KIRJA][B] Weighted network analysis: applications in genomics and systems biology

S Horvath - 2011 - books.google.com
High-throughput measurements of gene expression and genetic marker data facilitate
systems biologic and systems genetic data analysis strategies. Gene co-expression …

When is hub gene selection better than standard meta-analysis?

P Langfelder, PS Mischel, S Horvath - PloS one, 2013 - journals.plos.org
Since hub nodes have been found to play important roles in many networks, highly
connected hub genes are expected to play an important role in biology as well. However …

Listing k-cliques in sparse real-world graphs

M Danisch, O Balalau, M Sozio - Proceedings of the 2018 World Wide …, 2018 - dl.acm.org
Motivated by recent studies in the data mining community which require to efficiently list all k-
cliques, we revisit the iconic algorithm of Chiba and Nishizeki and develop the most efficient …

Belief network analysis: A relational approach to understanding the structure of attitudes

A Boutyline, S Vaisey - American journal of sociology, 2017 - journals.uchicago.edu
Many accounts of political belief systems conceive of them as networks of interrelated
opinions, in which some beliefs are central and others peripheral. This article formally shows …

Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

KR van Eijk, S de Jong, MPM Boks, T Langeveld… - BMC genomics, 2012 - Springer
Background The predominant model for regulation of gene expression through DNA
methylation is an inverse association in which increased methylation results in decreased …

Modules, networks and systems medicine for understanding disease and aiding diagnosis

M Gustafsson, CE Nestor, H Zhang, AL Barabási… - Genome medicine, 2014 - Springer
Many common diseases, such as asthma, diabetes or obesity, involve altered interactions
between thousands of genes. High-throughput techniques (omics) allow identification of …