Differentiable graph module (dgm) for graph convolutional networks

A Kazi, L Cosmo, SA Ahmadi, N Navab… - … on Pattern Analysis …, 2022 - ieeexplore.ieee.org
Graph deep learning has recently emerged as a powerful ML concept allowing to generalize
successful deep neural architectures to non-euclidean structured data. Such methods have …

Coco: A coupled contrastive framework for unsupervised domain adaptive graph classification

N Yin, L Shen, M Wang, L Lan, Z Ma… - International …, 2023 - proceedings.mlr.press
Although graph neural networks (GNNs) have achieved impressive achievements in graph
classification, they often need abundant task-specific labels, which could be extensively …

Interpretable chirality-aware graph neural network for quantitative structure activity relationship modeling in drug discovery

YL Liu, Y Wang, O Vu, R Moretti… - Proceedings of the …, 2023 - ojs.aaai.org
In computer-aided drug discovery, quantitative structure activity relation models are trained
to predict biological activity from chemical structure. Despite the recent success of applying …

Graph neural network based on graph kernel: A survey

L Xu, J Peng, X Jiang, E Chen, B Luo - Pattern Recognition, 2024 - Elsevier
Graph data are pervasive in real-world scenarios, and research on graph data has become
a research hotspot. Over the past few decades, significant advancements have been made …

GNN-LoFI: A novel graph neural network through localized feature-based histogram intersection

A Bicciato, L Cosmo, G Minello, L Rossi, A Torsello - Pattern Recognition, 2024 - Elsevier
Graph neural networks are increasingly becoming the framework of choice for graph-based
machine learning. In this paper, we propose a new graph neural network architecture that …

Graph-in-Graph (GiG): Learning interpretable latent graphs in non-Euclidean domain for biological and healthcare applications

K Zaripova, L Cosmo, A Kazi, SA Ahmadi… - Medical Image …, 2023 - Elsevier
Graphs are a powerful tool for representing and analyzing unstructured, non-Euclidean data
ubiquitous in the healthcare domain. Two prominent examples are molecule property …

Explaining the Power of Topological Data Analysis in Graph Machine Learning

FM Taiwo, U Islambekov, CG Akcora - arxiv preprint arxiv:2401.04250, 2024 - arxiv.org
Topological Data Analysis (TDA) has been praised by researchers for its ability to capture
intricate shapes and structures within data. TDA is considered robust in handling noisy and …

Motif-based graph representation learning with application to chemical molecules

Y Wang, S Chen, G Chen, E Shurberg, H Liu, P Hong - Informatics, 2023 - mdpi.com
This work considers the task of representation learning on the attributed relational graph
(ARG). Both the nodes and edges in an ARG are associated with attributes/features allowing …

Graph convolutional network with tree-guided anisotropic message passing

R Wang, Y Wang, C Zhang, S **ang, C Pan - Neural Networks, 2023 - Elsevier
Abstract Graph Convolutional Networks (GCNs) with naive message passing mechanisms
have limited performance due to the isotropic aggregation strategy. To remedy this …

A comparison of graph neural networks for malware classification

V Malhotra, K Potika, M Stamp - Journal of Computer Virology and …, 2024 - Springer
Managing the threat posed by malware requires accurate detection and classification
techniques. Traditional detection strategies, such as signature scanning, rely on manual …