The rise of biting during the Cenozoic fueled reef fish body shape diversification

KA Corn, ST Friedman, ED Burress… - Proceedings of the …, 2022 - pnas.org
Diversity of feeding mechanisms is a hallmark of reef fishes, but the history of this variation is
not fully understood. Here, we explore the emergence and proliferation of a biting mode of …

Phylogeny, biogeography and ecological diversification of New Caledonian palms (Arecaceae)

V Pérez-Calle, S Bellot, BG Kuhnhäuser… - Annals of …, 2024 - academic.oup.com
Abstract Background and Aims The geographical origin and evolutionary mechanisms
underpinning the rich and distinctive New Caledonian flora remain poorly understood. This …

On the evolution of fish–coral interactions

AC Siqueira, P Muruga, DR Bellwood - Ecology Letters, 2023 - Wiley Online Library
The biodiversity of tropical reefs is typified by the interaction between fishes and corals.
Despite the importance of this ecological association, coevolutionary patterns between …

Evolution of bioluminescence in Anthozoa with emphasis on Octocorallia

DM DeLeo, M Bessho-Uehara… - … of the Royal …, 2024 - royalsocietypublishing.org
Bioluminescence is a widespread phenomenon that has evolved multiple times across the
tree of life, converging among diverse fauna and habitat types. The ubiquity of …

Phylogenomics, lineage diversification rates, and the evolution of diadromy in Clupeiformes (anchovies, herrings, sardines, and relatives)

JP Egan, AM Simons, MS Alavi-Yeganeh… - Systematic …, 2024 - academic.oup.com
Migration independently evolved numerous times in animals, with a myriad of ecological
and evolutionary implications. In fishes, perhaps the most extreme form of migration is …

Comparison of Bayesian Coalescent Skyline Plot Models for Inferring Demographic Histories

RJ Billenstein, S Höhna - Molecular Biology and Evolution, 2024 - academic.oup.com
Bayesian coalescent skyline plot models are widely used to infer demographic histories. The
first (non-Bayesian) coalescent skyline plot model assumed a known genealogy as data …

Anatomy of a mega‐radiation: Biogeography and niche evolution in Astragalus

RA Folk, JLM Charboneau, M Belitz… - American Journal of …, 2024 - Wiley Online Library
Abstract Premise Astragalus (Fabaceae), with more than 3000 species, represents a
globally successful radiation of morphologically highly similar species predominant across …

Deep learning approaches to the phylogenetic placement of extinct pollen morphotypes

MÉ Adaïmé, S Kong, SW Punyasena - PNAS nexus, 2024 - academic.oup.com
The phylogenetic interpretation of pollen morphology is limited by our inability to recognize
the evolutionary history embedded in pollen features. Deep learning offers tools for …

Microchromosome fusions underpin convergent evolution of chameleon karyotypes

M Mezzasalma, JW Streicher, FM Guarino… - …, 2023 - academic.oup.com
Evolutionary shifts in chromosome compositions (karyotypes) are major drivers of lineage
and genomic diversification. Fusion of ancestral chromosomes is one hypothesized …

The occurrence birth–death process for combined-evidence analysis in macroevolution and epidemiology

J Andréoletti, A Zwaans, RCM Warnock… - Systematic …, 2022 - academic.oup.com
Phylodynamic models generally aim at jointly inferring phylogenetic relationships, model
parameters, and more recently, the number of lineages through time, based on molecular …