Targeting SARS-CoV-2: a systematic drug repurposing approach to identify promising inhibitors against 3C-like proteinase and 2′-O-ribose methyltransferase

RJ Khan, RK Jha, GM Amera, M Jain… - Journal of …, 2021 - Taylor & Francis
The recent pandemic associated with SARS-CoV-2, a virus of the Coronaviridae family, has
resulted in an unprecedented number of infected people. The highly contagious nature of …

Coordinating anions “to the rescue” of the lithium ion mobility in ternary solid polymer electrolytes plasticized with ionic liquids

JP Hoffknecht, A Wettstein, J Atik… - Advanced Energy …, 2023 - Wiley Online Library
Lithium salts with low coordinating anions such as bis (trifluoromethanesulfonyl) imide
(TFSI) have been the state‐of‐the‐art for polyethylene oxide (PEO)‐based “dry” polymer …

Non-encapsulation approach for high-performance Li–S batteries through controlled nucleation and growth

H Pan, J Chen, R Cao, V Murugesan, NN Rajput… - Nature Energy, 2017 - nature.com
High-surface-area, nanostructured carbon is widely used for encapsulating sulfur and
improving the cyclic stability of Li–S batteries, but the high carbon content and low packing …

Comparative roles of charge, π, and hydrophobic interactions in sequence-dependent phase separation of intrinsically disordered proteins

S Das, YH Lin, RM Vernon… - Proceedings of the …, 2020 - National Acad Sciences
Endeavoring toward a transferable, predictive coarse-grained explicit-chain model for
biomolecular condensates underlain by liquid–liquid phase separation (LLPS) of proteins …

[HTML][HTML] Atomistic resolution structure and dynamics of lipid bilayers in simulations and experiments

OHS Ollila, G Pabst - Biochimica et Biophysica Acta (BBA)-Biomembranes, 2016 - Elsevier
Accurate details on the sampled atomistic resolution structures of lipid bilayers can be
experimentally obtained by measuring C–H bond order parameters, spin relaxation rates …

Efficient and organic host–guest room-temperature phosphorescence: tunable triplet–singlet crossing and theoretical calculations for molecular packing

Y Lei, J Yang, W Dai, Y Lan, J Yang, X Zheng, J Shi… - Chemical …, 2021 - pubs.rsc.org
Organic host–guest doped materials exhibiting the room temperature phosphorescence
(RTP) phenomenon have attracted considerable attention. However, it is still challenging to …

Best bang for your buck: GPU nodes for GROMACS biomolecular simulations

C Kutzner, S Páll, M Fechner, A Esztermann… - 2015 - Wiley Online Library
The molecular dynamics simulation package GROMACS runs efficiently on a wide variety of
hardware from commodity workstations to high performance computing clusters. Hardware …

Impact of deep eutectic solvents (DESs) and individual DES components on alcohol dehydrogenase catalysis: connecting experimental data and molecular dynamics …

JP Bittner, N Zhang, L Huang, PD de María… - Green chemistry, 2022 - pubs.rsc.org
For a knowledge-based design of enzyme catalysis in deep eutectic solvents (DESs), the
influence of the DES properties (eg, water activity and viscosity) and the impact of DESs and …

[HTML][HTML] Insights into the function of ion channels by computational electrophysiology simulations

C Kutzner, DA Köpfer, JP Machtens… - … et Biophysica Acta (BBA …, 2016 - Elsevier
Ion channels are of universal importance for all cell types and play key roles in cellular
physiology and pathology. Increased insight into their functional mechanisms is crucial to …

Immunoinformatics analysis and in silico designing of a novel multi-epitope peptide vaccine against Staphylococcus aureus

N Hajighahramani, N Nezafat, M Eslami… - Infection, Genetics and …, 2017 - Elsevier
Staphylococcus aureus is a pathogen that causes a variety of infections in humans.
Methicillin-resistant S. aureus, which is an antibiotic-resistant form, is responsible for …